Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MIR379-201ENST00000362218 67 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 MIR548O-201ENST00000408583 114 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AL390729.2-201ENST00000416137 156 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 MTND4P3-201ENST00000417829 541 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC097510.1-201ENST00000510945 133 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC131281.1-201ENST00000522984 164 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Z94722.1-201ENST00000604328 474 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AL157770.1-201ENST00000623049 439 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNY3P3-201ENST00000363816 102 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNU6-571P-201ENST00000384128 107 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 MTATP6P19-201ENST00000413797 659 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 MIR369-201ENST00000362155 70 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNU6-429P-201ENST00000384582 108 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC108059.2-201ENST00000434626 151 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.34□□□□□ -2.62
COL12A1Q99715 AC026414.1-201ENST00000504046 698 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.34□□□□□ -2.62
COL12A1Q99715 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 RNU6-708P-201ENST00000384217 107 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 AC055872.1-201ENST00000570978 278 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
COL12A1Q99715 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 MIR582-201ENST00000365731 98 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 MTCO2P16-201ENST00000436962 677 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.35□□□□□ -2.63
COL12A1Q99715 RNA5SP245-201ENST00000364239 121 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 SNORD115-31-201ENST00000365318 82 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 MIR570-201ENST00000384917 97 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.36□□□□□ -2.63
COL12A1Q99715 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.36□□□□□ -2.63
COL12A1Q99715 RNU6-916P-201ENST00000516088 109 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 AL136370.1-201ENST00000608166 691 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 SNORD115-6-201ENST00000363942 82 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 RNU6-337P-201ENST00000391243 106 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 AC010486.2-201ENST00000505572 483 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 AC023158.2-201ENST00000614876 543 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.36□□□□□ -2.63
COL12A1Q99715 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU6-619P-201ENST00000365146 108 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU6-291P-201ENST00000384720 107 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.37□□□□□ -2.63
COL12A1Q99715 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.37□□□□□ -2.63
COL12A1Q99715 HSPE1P25-201ENST00000455484 251 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU6-543P-201ENST00000362576 108 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 SNORD19-201ENST00000391191 68 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
COL12A1Q99715 AL139421.1-201ENST00000423010 169 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 AC091946.2-201ENST00000606105 291 ntBASIC-1.37□□□□□ -2.63
COL12A1Q99715 RNU6-137P-201ENST00000363680 108 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU6-647P-201ENST00000364243 107 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 MTND1P34-201ENST00000438556 671 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU7-57P-201ENST00000459540 60 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 MIR5006-201ENST00000583027 110 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC091178.2-201ENST00000584401 117 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU6-395P-201ENST00000365662 106 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC026410.2-201ENST00000460281 156 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
COL12A1Q99715 SNORA43.2-201ENST00000516652 128 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU6-861P-201ENST00000516745 106 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC145350.1-201ENST00000567426 208 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 MIR30D-201ENST00000362283 70 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 SNORD38C-201ENST00000384381 69 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.38□□□□□ -2.63
COL12A1Q99715 GPR143P-201ENST00000434155 205 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 RBMX2P4-201ENST00000441256 376 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AL031274.1-201ENST00000450334 232 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC114982.2-201ENST00000461396 358 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.38□□□□□ -2.63
COL12A1Q99715 MIR4438-201ENST00000585271 93 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AL121757.2-201ENST00000611223 313 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC005520.5-201ENST00000613926 164 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 AC026585.1-201ENST00000619582 524 ntBASIC-1.38□□□□□ -2.63
COL12A1Q99715 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms