Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 snoU2_19.2-201ENST00000363024 80 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.128-201ENST00000363391 112 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.380-201ENST00000365663 111 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.466-201ENST00000384294 113 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.527-201ENST00000384573 102 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 MIR613-201ENST00000385248 95 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 RNU6-205P-201ENST00000390858 107 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 MIR1827-201ENST00000408549 66 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 RPL21P38-201ENST00000418090 167 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 AC091959.1-201ENST00000495857 238 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.666-201ENST00000516187 112 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 AC131281.1-201ENST00000522984 164 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 AC011195.1-201ENST00000578177 177 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 MIR4724-201ENST00000579485 89 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.138-201ENST00000363462 102 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.210-201ENST00000364161 110 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.214-201ENST00000364201 112 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.241-201ENST00000364470 117 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RNU5E-4P-201ENST00000364931 120 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RNU6-806P-201ENST00000365147 105 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RNA5SP496-201ENST00000391240 109 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 AC107297.1-201ENST00000459991 176 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RNU2-13P-201ENST00000515909 113 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 AL021707.8-201ENST00000609428 183 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
RAB3IPQ96QF0 RNU1-93P-201ENST00000364704 169 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 RNU6-326P-201ENST00000365480 107 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.455-201ENST00000384230 98 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 MTND4LP30-201ENST00000454092 297 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 AC004817.2-201ENST00000561794 651 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 AP000753.3-201ENST00000604083 169 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 AC134503.1-201ENST00000633048 54 ntBASIC0.7□□□□□ -2.3
RAB3IPQ96QF0 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.26-201ENST00000362539 101 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 SNORD45.3-201ENST00000363836 72 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.216-201ENST00000364205 93 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNY1-201ENST00000364228 113 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU4-10P-201ENST00000364383 140 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU6-867P-201ENST00000364956 107 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU6-125P-201ENST00000384505 107 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU7-67P-201ENST00000459003 62 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.711-201ENST00000516993 102 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 MIR6515-201ENST00000619843 57 ntBASIC0.69□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.16-201ENST00000362421 102 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.158-201ENST00000363651 101 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 MIR548P-201ENST00000408336 84 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 MTCO2P12-201ENST00000427426 682 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 AL355297.3-201ENST00000604082 446 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 snoU18.1-201ENST00000629629 71 ntBASIC0.68□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.64-201ENST00000362845 102 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 RNU6-1138P-201ENST00000365359 106 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.486-201ENST00000384398 107 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.535-201ENST00000384612 99 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.587-201ENST00000391210 103 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 AC090844.1-201ENST00000422019 156 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 RNU6-958P-201ENST00000516995 106 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 AC113195.1-201ENST00000579952 141 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 AC134878.1-201ENST00000619901 243 ntBASIC0.67□□□□□ -2.3
RAB3IPQ96QF0 Y_RNA.61-201ENST00000362835 102 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 snoU13.16-201ENST00000459350 104 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 SNORD77.4-201ENST00000516158 81 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 SNORA27.4-201ENST00000516650 95 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AC007751.1-201ENST00000529260 376 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AP003733.2-201ENST00000529409 171 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AC006006.1-201ENST00000603082 144 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AL008718.3-201ENST00000610217 321 ntBASIC0.66□□□□□ -2.3
RAB3IPQ96QF0 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms