Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RNU6-938P-201ENST00000411285 103 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 U8.20-201ENST00000459445 131 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 MIR2115-201ENST00000516657 100 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 AC040926.1-201ENST00000530195 238 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 AC015726.2-201ENST00000620112 122 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 uc_338.22-201ENST00000622722 187 ntBASIC0.29□□□□□ -2.36
CSPG4P5Q96PW8 Y_RNA.136-201ENST00000363444 102 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 Y_RNA.197-201ENST00000364004 102 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR140-201ENST00000385282 100 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR1302-11-201ENST00000408051 138 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR1302-9-201ENST00000408365 138 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR1302-10-201ENST00000408734 138 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 RNU6-121P-201ENST00000410525 99 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 RNU6-383P-201ENST00000410864 94 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 SNORD83.1-201ENST00000411362 77 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 RNU6-976P-201ENST00000516086 111 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 RPS29P30-201ENST00000600975 111 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 AL080274.1-201ENST00000605565 220 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 AC020891.4-201ENST00000605745 93 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR1302-2-201ENST00000607096 138 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 AC006157.1-201ENST00000611750 366 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
CSPG4P5Q96PW8 Y_RNA.31-201ENST00000362574 102 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 SNORD113-8-201ENST00000363497 74 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.395-201ENST00000383945 109 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 RNY3P14-201ENST00000384309 102 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-21P-201ENST00000384710 107 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 MIR548A2-201ENST00000384956 97 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-913P-201ENST00000390913 95 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 SNORD115-46-201ENST00000390982 71 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 MTCO1P5-201ENST00000433573 344 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 POLR2KP2-201ENST00000438155 177 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 MRPS35P2-201ENST00000508242 191 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-1170P-201ENST00000515974 106 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 MIR2681-201ENST00000581814 105 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 SNORD113-5-201ENST00000607261 78 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 AC122108.2-201ENST00000611946 526 ntBASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4P5Q96PW8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-934P-201ENST00000365154 107 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 SNORD42.2-201ENST00000365570 69 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.587-201ENST00000391210 103 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MIR548O-201ENST00000408583 114 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-847P-201ENST00000411115 108 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 AC024067.1-201ENST00000426199 223 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MTND4P19-201ENST00000446659 478 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 SEPT14P8-201ENST00000508026 178 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-475P-201ENST00000516073 104 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.666-201ENST00000516187 112 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RNU7-149P-201ENST00000516739 59 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MIR4804-201ENST00000581683 73 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MIR4795-201ENST00000584182 89 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 C8orf59P2-201ENST00000603441 271 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 RAC1P9-201ENST00000604990 392 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
CSPG4P5Q96PW8 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 MIR18A-201ENST00000362310 71 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 RNU4-73P-201ENST00000363164 141 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 RNA5SP457-201ENST00000363657 124 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.356-201ENST00000365475 113 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 MIR520H-201ENST00000385126 88 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 PMCHL1-202ENST00000423102 261 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-397P-201ENST00000516226 104 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 uc_338.4-201ENST00000616635 176 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 AL138825.1-201ENST00000618587 192 ntBASIC0.25□□□□□ -2.37
CSPG4P5Q96PW8 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-899P-201ENST00000363947 107 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-1138P-201ENST00000365359 106 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.424-201ENST00000384063 103 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.486-201ENST00000384398 107 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MIR520F-201ENST00000384824 87 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MTND5P20-201ENST00000448677 143 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 Y_RNA.639-201ENST00000458981 102 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MTND3P22-201ENST00000510932 243 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 SNORA18.4-201ENST00000516440 124 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 RNU6-897P-201ENST00000517135 105 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MIR4771-2-201ENST00000577758 74 ntBASIC0.24□□□□□ -2.37
CSPG4P5Q96PW8 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms