Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.91□□□□□ -2.26
SKA1Q96BD8 AC104465.1-201ENST00000611365 139 ntBASIC0.91□□□□□ -2.26
SKA1Q96BD8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.91□□□□□ -2.26
SKA1Q96BD8 MTND4P29-201ENST00000503122 1372 ntBASIC0.91□□□□□ -2.26
SKA1Q96BD8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SKA1Q96BD8 Y_RNA.19-201ENST00000362462 99 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 Y_RNA.105-201ENST00000363182 111 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 Y_RNA.293-201ENST00000364908 93 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 RNU6-383P-201ENST00000410864 94 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 BTF3P11-201ENST00000426582 477 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 MTCO2P12-201ENST00000427426 682 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 RNA5SP480-201ENST00000516840 109 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 Y_RNA.711-201ENST00000516993 102 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 MIR4662B-201ENST00000579498 81 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 AC012433.1-201ENST00000588916 398 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 AC243994.1-201ENST00000618627 109 ntBASIC0.9□□□□□ -2.27
SKA1Q96BD8 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 RNU6-1138P-201ENST00000365359 106 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 MIR605-201ENST00000385078 83 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 MIR548O-201ENST00000408583 114 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.89□□□□□ -2.27
SKA1Q96BD8 AC098869.1-201ENST00000481627 292 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 AC091959.1-201ENST00000495857 238 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.89□□□□□ -2.27
SKA1Q96BD8 AL049861.1-201ENST00000603130 150 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 AL021707.8-201ENST00000609428 183 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 MTND1P7-201ENST00000632801 297 ntBASIC0.89□□□□□ -2.27
SKA1Q96BD8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.210-201ENST00000364161 110 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.214-201ENST00000364201 112 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.376-201ENST00000365638 108 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.394-201ENST00000383942 103 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 AC006461.1-201ENST00000412637 326 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 ELOCP20-201ENST00000422460 345 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 RNU7-25P-201ENST00000516544 62 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 RNU6-126P-201ENST00000516685 103 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.88□□□□□ -2.27
SKA1Q96BD8 MIR548AO-201ENST00000579992 96 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
SKA1Q96BD8 snoU2_19.2-201ENST00000363024 80 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 SNORD114-26-201ENST00000363543 72 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 Y_RNA.541-201ENST00000384640 113 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 MT-TN-201ENST00000387400 73 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SKA1Q96BD8 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 RNU2-13P-201ENST00000515909 113 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 SNORA27.4-201ENST00000516650 95 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 AC108706.1-201ENST00000611053 297 ntBASIC0.87□□□□□ -2.27
SKA1Q96BD8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
SKA1Q96BD8 MIR1-1-201ENST00000362147 71 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 Y_RNA.527-201ENST00000384573 102 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 MIR7-2-201ENST00000384970 110 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 RPS26P5-201ENST00000418544 335 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 AC113195.1-201ENST00000579952 141 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 MIR5688-201ENST00000580619 83 ntBASIC0.86□□□□□ -2.27
SKA1Q96BD8 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 RNU6-662P-201ENST00000384253 104 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 MIR1827-201ENST00000408549 66 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 AP003733.2-201ENST00000529409 171 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.85□□□□□ -2.27
SKA1Q96BD8 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 Y_RNA.802-201ENST00000614892 130 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.85□□□□□ -2.27
SKA1Q96BD8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SKA1Q96BD8 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-34-201ENST00000362441 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-12-201ENST00000362583 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-29-201ENST00000362834 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-9-201ENST00000362912 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-21-201ENST00000362963 81 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-14-201ENST00000363090 81 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-13-201ENST00000363358 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 Y_RNA.138-201ENST00000363462 102 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-41-201ENST00000363608 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-11-201ENST00000363616 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-5-201ENST00000363633 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-39-201ENST00000363694 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-4-201ENST00000363810 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-16-201ENST00000363887 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-6-201ENST00000363942 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 Y_RNA.202-201ENST00000364083 110 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-42-201ENST00000364273 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 Y_RNA.241-201ENST00000364470 117 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-15-201ENST00000364809 81 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-1-201ENST00000364961 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-26-201ENST00000365067 82 ntBASIC0.84□□□□□ -2.27
SKA1Q96BD8 SNORD115-10-201ENST00000365073 81 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms