Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORD115-36-201ENST00000365629 82 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VPS33AQ96AX1 SNORA24-201ENST00000384096 131 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 RPS26P5-201ENST00000418544 335 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 AC087499.4-201ENST00000448505 178 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 AC098869.1-201ENST00000481627 292 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS33AQ96AX1 MIR4298-201ENST00000584380 73 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 SNORD115-40-201ENST00000606510 82 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
VPS33AQ96AX1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
VPS33AQ96AX1 UBE2WP1-201ENST00000362030 340 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 RNU6-580P-201ENST00000365159 107 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 RPL21P38-201ENST00000418090 167 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 snoU13.16-201ENST00000459350 104 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 MIR4680-201ENST00000580906 66 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 MIR4769-201ENST00000584126 77 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 MIR3171-201ENST00000584270 74 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 AC012433.1-201ENST00000588916 398 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 AL359821.1-201ENST00000605519 182 ntBASIC0.74□□□□□ -2.29
VPS33AQ96AX1 MIR1-1-201ENST00000362147 71 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 RNU6-662P-201ENST00000384253 104 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 MIR215-201ENST00000384858 110 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 RNA5SP95-201ENST00000410319 137 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 MTCO2P24-201ENST00000515611 426 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 AP003733.2-201ENST00000529409 171 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 MIR4264-201ENST00000583520 66 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.73□□□□□ -2.29
VPS33AQ96AX1 SNORD115-28-201ENST00000363931 81 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AL731563.1-201ENST00000442202 214 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AC108729.3-201ENST00000513484 108 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AC020661.2-201ENST00000560114 134 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AL008718.3-201ENST00000610217 321 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 AC068700.1-201ENST00000565862 3754 ntBASIC0.72□□□□□ -2.29
VPS33AQ96AX1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.71□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.71□□□□□ -2.3
VPS33AQ96AX1 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.71□□□□□ -2.3
VPS33AQ96AX1 SERF1AP1-201ENST00000514575 187 ntBASIC0.71□□□□□ -2.3
VPS33AQ96AX1 RNU6-806P-201ENST00000365147 105 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS33AQ96AX1 TRMT112P2-201ENST00000512910 132 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 AP000942.4-201ENST00000604811 241 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 snoU18.1-201ENST00000629629 71 ntBASIC0.7□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS33AQ96AX1 RNU6-113P-201ENST00000516653 101 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 AC007751.1-201ENST00000529260 376 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 MIR4498-201ENST00000577599 66 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 AC006006.1-201ENST00000603082 144 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 RNU6-797P-201ENST00000363101 109 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 SNORD45.3-201ENST00000363836 72 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 RNU6-125P-201ENST00000384505 107 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 SNORA8.3-201ENST00000384679 139 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 SNORA40.5-201ENST00000391061 128 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 AC113618.1-201ENST00000416747 285 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 RNU7-73P-201ENST00000458743 63 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 RNU7-67P-201ENST00000459003 62 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.68□□□□□ -2.3
VPS33AQ96AX1 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.216-201ENST00000364205 93 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 SNORA63C-201ENST00000364578 129 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 RNU6-237P-201ENST00000515985 71 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 RNU6-365P-201ENST00000517113 106 ntBASIC0.67□□□□□ -2.3
VPS33AQ96AX1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS33AQ96AX1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
VPS33AQ96AX1 MIR96-201ENST00000362288 78 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 RNY1P10-201ENST00000363268 113 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 MIR518F-201ENST00000384973 87 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 SNORA26-201ENST00000391286 122 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 RNU6-985P-201ENST00000410182 104 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 RNU6-693P-201ENST00000516134 107 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 RNU7-53P-201ENST00000516705 60 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms