Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 RPL23AP63-201ENST00000498752 471 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 SNORD33.1-201ENST00000516213 88 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 MIR4435-1-201ENST00000582552 80 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 MIR6129-201ENST00000616087 109 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRF1Q92994 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
BRF1Q92994 RNY4P18-201ENST00000391107 89 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 AC015922.2-201ENST00000435593 184 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 AC025033.1-201ENST00000463883 194 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 RNU6-589P-201ENST00000516485 107 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 Y_RNA.709-201ENST00000516952 92 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 MTND5P34-201ENST00000568888 325 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 Y_RNA.783-201ENST00000613546 102 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BRF1Q92994 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BRF1Q92994 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.41□□□□□ -2.02
BRF1Q92994 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BRF1Q92994 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
BRF1Q92994 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.02
BRF1Q92994 RNA5SP37-201ENST00000365420 130 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 AL627390.1-201ENST00000396055 340 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 RNA5SP425-201ENST00000410336 112 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 RNU2-7P-201ENST00000410794 178 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 RNA5SP136-201ENST00000410906 107 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BRF1Q92994 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.4□□□□□ -2.03
BRF1Q92994 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.4□□□□□ -2.03
BRF1Q92994 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
BRF1Q92994 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
BRF1Q92994 MIR548A3-201ENST00000385297 97 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.39□□□□□ -2.03
BRF1Q92994 RNU7-80P-201ENST00000459562 61 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 RNU7-12P-201ENST00000516030 62 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 AC078899.2-201ENST00000595282 212 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 AL137067.1-201ENST00000615933 120 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 AL513423.1-201ENST00000621695 132 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 MTND5P18-201ENST00000445624 1801 ntBASIC2.39□□□□□ -2.03
BRF1Q92994 RNU6-349P-201ENST00000362402 107 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 RNA5SP100-201ENST00000410903 110 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 RNA5SP59-201ENST00000410922 110 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 snoU13.27-201ENST00000459278 104 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 AC021506.2-201ENST00000612354 169 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.38□□□□□ -2.03
BRF1Q92994 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
BRF1Q92994 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
BRF1Q92994 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.37□□□□□ -2.03
BRF1Q92994 Y_RNA.366-201ENST00000365540 102 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 Y_RNA.454-201ENST00000384224 113 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 MIR452-201ENST00000385020 85 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 AC099513.1-201ENST00000490423 301 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 RNU1-40P-201ENST00000516816 164 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 RNU1-97P-201ENST00000516872 164 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 SNORA18.7-201ENST00000516910 131 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 MIR4709-201ENST00000577272 72 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 MIR5089-201ENST00000580047 84 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 SNRPGP19-201ENST00000603826 189 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 AL121890.5-201ENST00000620848 304 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 MIR219B-201ENST00000637023 88 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.37□□□□□ -2.03
BRF1Q92994 AC131280.1-202ENST00000624067 4211 ntBASIC2.37□□□□□ -2.03
BRF1Q92994 RNU6-755P-201ENST00000364400 103 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 RNU6-153P-201ENST00000364422 104 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 RNU1-133P-201ENST00000364867 167 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 Y_RNA.351-201ENST00000365436 96 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 SNORD116-21-201ENST00000384507 92 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 MIR1263-201ENST00000408324 86 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 AC063976.4-201ENST00000421971 163 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 RPL23AP94-201ENST00000512518 302 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 RNU7-70P-201ENST00000516941 66 ntBASIC2.36□□□□□ -2.03
BRF1Q92994 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.36□□□□□ -2.03
BRF1Q92994 SNORD115-34-201ENST00000362441 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-12-201ENST00000362583 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-29-201ENST00000362834 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-9-201ENST00000362912 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-21-201ENST00000362963 81 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-14-201ENST00000363090 81 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-13-201ENST00000363358 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-41-201ENST00000363608 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-11-201ENST00000363616 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-5-201ENST00000363633 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-39-201ENST00000363694 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-4-201ENST00000363810 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-16-201ENST00000363887 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-6-201ENST00000363942 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-42-201ENST00000364273 82 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-15-201ENST00000364809 81 ntBASIC2.35□□□□□ -2.03
BRF1Q92994 SNORD115-1-201ENST00000364961 82 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms