Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNY3P15-201ENST00000516297 97 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 RNU6-453P-201ENST00000516819 85 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 MIR3664-201ENST00000579074 99 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AP001282.2-201ENST00000616149 309 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AC008163.1-202ENST00000636004 2889 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.84-201ENST00000363011 104 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 RNU6-899P-201ENST00000363947 107 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 RNU6-639P-201ENST00000384074 107 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 MIR19B1-201ENST00000384829 87 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 MIR548A2-201ENST00000384956 97 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 RNU6-1248P-201ENST00000391096 64 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 SNORA75.2-201ENST00000391138 150 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 SNORA75.3-201ENST00000391231 150 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 MIR1252-201ENST00000408861 65 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 SNRPGP14-201ENST00000435400 219 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 snoU13.21-201ENST00000459368 105 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 RNU7-41P-201ENST00000515917 61 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 RNU6-322P-201ENST00000516010 103 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 AC136628.3-201ENST00000521868 290 ntBASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.286-201ENST00000364813 102 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 SNORD50B-201ENST00000364995 70 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RNU6-969P-201ENST00000383900 105 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RNU6-472P-201ENST00000384299 107 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.621-201ENST00000411065 96 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 U8.19-201ENST00000459095 133 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 NDUFA4P2-201ENST00000489989 244 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RPS26P48-201ENST00000491713 339 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RNU6-1143P-201ENST00000516125 104 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RNU6-693P-201ENST00000516134 107 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 MIR5589-201ENST00000579442 60 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 MIR6079-201ENST00000635807 62 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 AC134026.1-201ENST00000623249 2239 ntBASIC0.59□□□□□ -2.31
SHROOM3Q8TF72 RNU6-674P-201ENST00000363831 107 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 RNU4-10P-201ENST00000364383 140 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 RNU4-17P-201ENST00000365598 141 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 RNU6-738P-201ENST00000384531 106 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 SNORD72-201ENST00000390994 80 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 MIR1265-201ENST00000408444 86 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 HMGN2P32-201ENST00000444648 269 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 AL133373.1-201ENST00000497098 94 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 RNU7-43P-201ENST00000516554 64 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 uc_338.4-201ENST00000616635 176 ntBASIC0.59□□□□□ -2.32
SHROOM3Q8TF72 UBE2WP1-201ENST00000362030 340 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.19-201ENST00000362462 99 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 RNU1-36P-201ENST00000365130 165 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.326-201ENST00000365176 113 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.483-201ENST00000384380 101 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 SNORD28B-201ENST00000390993 75 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.587-201ENST00000391210 103 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 MTCYBP6-201ENST00000441810 138 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 SNORA18.4-201ENST00000516440 124 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 RNU7-25P-201ENST00000516544 62 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 SNORA74.3-201ENST00000517108 154 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 AC100767.1-201ENST00000528178 123 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 AC006504.6-201ENST00000590142 199 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 AC008737.2-201ENST00000599446 118 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 AL391903.3-201ENST00000612158 163 ntBASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SHROOM3Q8TF72 SNORA63-201ENST00000363450 132 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-770P-201ENST00000363929 105 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1227P-201ENST00000383981 107 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-484P-201ENST00000384016 107 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 MIR329-2-201ENST00000385029 84 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 MIR548O-201ENST00000408583 114 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-383P-201ENST00000410864 94 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SNRPGP10-201ENST00000432323 225 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1007P-201ENST00000516586 107 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNA5SP285-201ENST00000516619 119 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SNORD45.4-201ENST00000516629 73 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AC007751.1-201ENST00000529260 376 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 MIR2681-201ENST00000581814 105 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.7-201ENST00000362352 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.82-201ENST00000363000 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.92-201ENST00000363043 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.235-201ENST00000364412 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.275-201ENST00000364726 110 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.306-201ENST00000365015 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.308-201ENST00000365043 101 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.312-201ENST00000365089 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.322-201ENST00000365151 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SNORD41-201ENST00000386967 70 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SNORD99-201ENST00000408612 74 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AC063976.4-201ENST00000421971 163 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.650-201ENST00000459002 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.777-201ENST00000516982 102 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms