Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.07□□□□□ -2.4
LMX1AQ8TE12 SNORD92-201ENST00000585078 85 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 MIR6740-201ENST00000618268 113 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 SNORD115-34-201ENST00000362441 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-12-201ENST00000362583 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-29-201ENST00000362834 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-9-201ENST00000362912 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-21-201ENST00000362963 81 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-14-201ENST00000363090 81 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-13-201ENST00000363358 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORA36.1-201ENST00000363424 132 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-41-201ENST00000363608 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-11-201ENST00000363616 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-5-201ENST00000363633 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-39-201ENST00000363694 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-4-201ENST00000363810 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-16-201ENST00000363887 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-6-201ENST00000363942 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-42-201ENST00000364273 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-15-201ENST00000364809 81 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-1-201ENST00000364961 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-26-201ENST00000365067 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-10-201ENST00000365073 81 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-43-201ENST00000365503 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-36-201ENST00000365629 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.551-201ENST00000384661 102 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 MIR802-201ENST00000390235 94 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.653-201ENST00000459091 95 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 AC005357.1-201ENST00000588399 301 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 SNORD115-40-201ENST00000606510 82 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 AC093783.1-201ENST00000612976 329 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 AC067863.3-201ENST00000624172 122 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 MIR4272-201ENST00000635924 64 ntBASIC0.06□□□□□ -2.4
LMX1AQ8TE12 MIR329-2-201ENST00000385029 84 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 MIR563-201ENST00000385080 79 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 MIR628-201ENST00000385229 95 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 FCF1P9-201ENST00000412546 282 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC096644.2-201ENST00000429278 159 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC107297.1-201ENST00000459991 176 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 SNORA18.4-201ENST00000516440 124 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 RNU7-25P-201ENST00000516544 62 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 RNA5SP395-201ENST00000516567 118 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 RNU6-699P-201ENST00000517081 110 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC069113.3-201ENST00000521019 150 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC124312.5-201ENST00000604451 268 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC113139.1-201ENST00000605049 239 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.772-201ENST00000606692 102 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC011373.1-201ENST00000607270 237 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AL021707.8-201ENST00000609428 183 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 AC092794.1-201ENST00000612734 582 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 MIR6755-201ENST00000619993 66 ntBASIC0.05□□□□□ -2.4
LMX1AQ8TE12 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU6-1048P-201ENST00000364054 107 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU4-40P-201ENST00000364351 143 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 SNORA8.2-201ENST00000384372 139 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 SNORD38B-201ENST00000384690 67 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU6-913P-201ENST00000390913 95 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.587-201ENST00000391210 103 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 SNORA26.5-201ENST00000391215 123 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU6-938P-201ENST00000411285 103 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 AC236972.2-201ENST00000434979 310 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU7-102P-201ENST00000458948 62 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 snoU13.2-201ENST00000459201 104 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 RNU6-1170P-201ENST00000515974 106 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 AC007751.1-201ENST00000529260 376 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 MIR3678-201ENST00000578455 94 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 MIR3145-201ENST00000580727 82 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 AL121655.1-201ENST00000605811 308 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 AC134878.1-201ENST00000619901 243 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 SNORD38B-202ENST00000625943 69 ntBASIC0.04□□□□□ -2.4
LMX1AQ8TE12 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.160-201ENST00000363677 92 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1138P-201ENST00000365359 106 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.463-201ENST00000384271 102 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 MT-TL1-201ENST00000386347 75 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1319P-201ENST00000390855 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-747P-201ENST00000390928 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 SNORA40.5-201ENST00000391061 128 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-241P-201ENST00000391148 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 MIR548O-201ENST00000408583 114 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 SNORD71-201ENST00000411292 86 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms