Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 U4.1-201ENST00000620349 87 ntBASIC1.45□□□□□ -2.18
USP38Q8NB14 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
USP38Q8NB14 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
USP38Q8NB14 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.82-201ENST00000363000 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.92-201ENST00000363043 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.235-201ENST00000364412 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.306-201ENST00000365015 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.312-201ENST00000365089 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.322-201ENST00000365151 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 MIR526A2-201ENST00000390198 65 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.650-201ENST00000459002 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 SNORD111.1-201ENST00000516421 86 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.681-201ENST00000516445 113 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 RNU7-149P-201ENST00000516739 59 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.777-201ENST00000516982 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.771-201ENST00000598668 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Pinc.1-201ENST00000616452 154 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 AC015726.2-201ENST00000620112 122 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.789-201ENST00000622480 102 ntBASIC1.44□□□□□ -2.18
USP38Q8NB14 Y_RNA.65-201ENST00000362846 100 ntBASIC1.43□□□□□ -2.18
USP38Q8NB14 Y_RNA.433-201ENST00000384089 102 ntBASIC1.43□□□□□ -2.18
USP38Q8NB14 MIR4643-201ENST00000577473 78 ntBASIC1.43□□□□□ -2.18
USP38Q8NB14 MIR4503-201ENST00000582187 83 ntBASIC1.43□□□□□ -2.18
USP38Q8NB14 AL162730.1-201ENST00000605734 292 ntBASIC1.43□□□□□ -2.18
USP38Q8NB14 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
USP38Q8NB14 RNU6-268P-201ENST00000364174 107 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 Y_RNA.242-201ENST00000364473 110 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 Y_RNA.416-201ENST00000384014 113 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 MIR15B-201ENST00000385045 98 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.42□□□□□ -2.18
USP38Q8NB14 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.42□□□□□ -2.18
USP38Q8NB14 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 AC245047.8-201ENST00000456455 284 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.42□□□□□ -2.18
USP38Q8NB14 AC062037.2-201ENST00000610137 73 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 AL365265.1-201ENST00000621045 234 ntBASIC1.42□□□□□ -2.18
USP38Q8NB14 Y_RNA.229-201ENST00000364347 113 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 RNU6-702P-201ENST00000364982 107 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 SNORD2.1-201ENST00000458762 69 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.41□□□□□ -2.18
USP38Q8NB14 SNORD116-28-201ENST00000516123 91 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 BX284668.6-201ENST00000606899 438 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.41□□□□□ -2.18
USP38Q8NB14 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
USP38Q8NB14 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 Y_RNA.350-201ENST00000365409 98 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 Y_RNA.518-201ENST00000384552 113 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 SNORD123-201ENST00000459473 70 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.4□□□□□ -2.19
USP38Q8NB14 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 Y_RNA.668-201ENST00000516233 93 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 AC100767.1-201ENST00000528178 123 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 MIR3149-201ENST00000584629 83 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 AL021707.8-201ENST00000609428 183 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 7SK.10-201ENST00000621414 298 ntBASIC1.4□□□□□ -2.19
USP38Q8NB14 Y_RNA.76-201ENST00000362931 109 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 RNA5SP457-201ENST00000363657 124 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 MT-TT-201ENST00000387460 66 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.39□□□□□ -2.19
USP38Q8NB14 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 RN7SKP164-201ENST00000516138 266 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.39□□□□□ -2.19
USP38Q8NB14 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 AL442067.1-201ENST00000613261 223 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.39□□□□□ -2.19
USP38Q8NB14 Y_RNA.144-201ENST00000363521 113 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 Y_RNA.292-201ENST00000364904 97 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 Y_RNA.622-201ENST00000411091 108 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 SNRPGP14-201ENST00000435400 219 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.38□□□□□ -2.19
USP38Q8NB14 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.38□□□□□ -2.19
USP38Q8NB14 MTND1P19-201ENST00000511780 315 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 MIR5688-201ENST00000580619 83 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 MIR3128-201ENST00000581957 66 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 MIR4282-201ENST00000583613 67 ntBASIC1.38□□□□□ -2.19
USP38Q8NB14 Y_RNA.262-201ENST00000364641 102 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 RNU1-133P-201ENST00000364867 167 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 Y_RNA.304-201ENST00000365011 112 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 RNU6-463P-201ENST00000384340 107 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 Y_RNA.562-201ENST00000384695 113 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 SNORD77.4-201ENST00000516158 81 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 Y_RNA.666-201ENST00000516187 112 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 AC006441.5-201ENST00000612680 209 ntBASIC1.37□□□□□ -2.19
USP38Q8NB14 Y_RNA.115-201ENST00000363272 98 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 Y_RNA.193-201ENST00000363979 102 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 Y_RNA.199-201ENST00000364014 102 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 Y_RNA.452-201ENST00000384202 108 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 MIR193B-201ENST00000384907 83 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 MIR548O-201ENST00000408583 114 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms