Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 Y_RNA.537-201ENST00000384626 109 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 AC067940.1-201ENST00000458411 300 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 Y_RNA.641-201ENST00000459414 105 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 SCARNA8-201ENST00000515924 131 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 RNU6-1143P-201ENST00000516125 104 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 MIR2115-201ENST00000516657 100 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 MIR548AO-201ENST00000579992 96 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.64□□□□□ -2.31
SKA3Q8IX90 7SK.10-201ENST00000621414 298 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.64□□□□□ -2.31
SKA3Q8IX90 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 Y_RNA.547-201ENST00000384654 119 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 MIR499A-201ENST00000384903 122 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 RNA5SP496-201ENST00000391240 109 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 RNU6-847P-201ENST00000411115 108 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.63□□□□□ -2.31
SKA3Q8IX90 SNORD77.4-201ENST00000516158 81 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 RNU6-1137P-201ENST00000517073 99 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 MTND1P7-201ENST00000632801 297 ntBASIC0.63□□□□□ -2.31
SKA3Q8IX90 Y_RNA.84-201ENST00000363011 104 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 Y_RNA.202-201ENST00000364083 110 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 RNU4-10P-201ENST00000364383 140 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 RNU6-1138P-201ENST00000365359 106 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 SNORA33.2-201ENST00000365413 134 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 SNORD111-201ENST00000408139 94 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 SERF1AP1-201ENST00000514575 187 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 RNU6-1338P-201ENST00000516328 91 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 SNORA27.4-201ENST00000516650 95 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.62□□□□□ -2.31
SKA3Q8IX90 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 AC243994.1-201ENST00000618627 109 ntBASIC0.62□□□□□ -2.31
SKA3Q8IX90 SNORD113.3-201ENST00000364630 78 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 RNU6-396P-201ENST00000365369 105 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 RNU6-639P-201ENST00000384074 107 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 AL731563.1-201ENST00000442202 214 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 Y_RNA.666-201ENST00000516187 112 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 Y_RNA.676-201ENST00000516393 96 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 Y_RNA.701-201ENST00000516812 110 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 SCARNA24.2-201ENST00000516968 130 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 RNU6-570P-201ENST00000517051 105 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.61□□□□□ -2.31
SKA3Q8IX90 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.61□□□□□ -2.31
SKA3Q8IX90 MIR4662B-201ENST00000579498 81 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 AC006006.1-201ENST00000603082 144 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 Y_RNA.802-201ENST00000614892 130 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 snoU18.1-201ENST00000629629 71 ntBASIC0.61□□□□□ -2.31
SKA3Q8IX90 UBE2WP1-201ENST00000362030 340 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 Y_RNA.241-201ENST00000364470 117 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 MIR526A2-201ENST00000390198 65 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 RNU6-985P-201ENST00000410182 104 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 RNU6-1203P-201ENST00000410703 110 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.6□□□□□ -2.31
SKA3Q8IX90 MTCYBP6-201ENST00000441810 138 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 RNU2-13P-201ENST00000515909 113 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.6□□□□□ -2.31
SKA3Q8IX90 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.6□□□□□ -2.31
SKA3Q8IX90 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
SKA3Q8IX90 Y_RNA.168-201ENST00000363740 102 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 Y_RNA.275-201ENST00000364726 110 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 RNU6-211P-201ENST00000384047 107 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 RNU6-205P-201ENST00000390858 107 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 SNORD99-201ENST00000408612 74 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 AC113618.1-201ENST00000416747 285 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 MTCO2P24-201ENST00000515611 426 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 RNU6-1153P-201ENST00000516760 105 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 AC044792.1-201ENST00000593294 196 ntBASIC0.59□□□□□ -2.31
SKA3Q8IX90 MIR377-201ENST00000362145 69 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 Y_RNA.486-201ENST00000384398 107 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 RNU6-1289P-201ENST00000384431 106 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 RNU6-125P-201ENST00000384505 107 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 SNORA8.3-201ENST00000384679 139 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 RNU6-713P-201ENST00000384761 107 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SKA3Q8IX90 Y_RNA.587-201ENST00000391210 103 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 MIR1827-201ENST00000408549 66 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 MIR548J-201ENST00000408833 112 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AC007751.1-201ENST00000529260 376 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AL136317.1-201ENST00000612653 226 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 AC134878.1-201ENST00000619901 243 ntBASIC0.58□□□□□ -2.32
SKA3Q8IX90 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.58□□□□□ -2.32
SKA3Q8IX90 SNORD115-34-201ENST00000362441 82 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms