Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-383P-201ENST00000410864 94 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 AC023449.1-201ENST00000454464 154 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNU7-56P-201ENST00000458744 62 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.666-201ENST00000516187 112 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-1046P-201ENST00000516538 107 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 AC006157.1-201ENST00000611750 366 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.529-201ENST00000384586 119 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-764P-201ENST00000516396 105 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 SNORA18.4-201ENST00000516440 124 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-958P-201ENST00000516995 106 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 AL355297.3-201ENST00000604082 446 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 MIR6515-201ENST00000619843 57 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.27□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-34-201ENST00000362441 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-12-201ENST00000362583 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-29-201ENST00000362834 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-9-201ENST00000362912 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-21-201ENST00000362963 81 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-14-201ENST00000363090 81 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-13-201ENST00000363358 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD113-8-201ENST00000363497 74 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-41-201ENST00000363608 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-11-201ENST00000363616 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-5-201ENST00000363633 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-39-201ENST00000363694 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-4-201ENST00000363810 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-16-201ENST00000363887 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-6-201ENST00000363942 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-42-201ENST00000364273 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-15-201ENST00000364809 81 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-1-201ENST00000364961 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-26-201ENST00000365067 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-10-201ENST00000365073 81 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.315-201ENST00000365117 102 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-43-201ENST00000365503 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-36-201ENST00000365629 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-144P-201ENST00000383951 107 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 MRPS35P2-201ENST00000508242 191 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 AC007751.1-201ENST00000529260 376 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 AL049861.1-201ENST00000603130 150 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-40-201ENST00000606510 82 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 AL021707.8-201ENST00000609428 183 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 AC010332.2-201ENST00000613083 1904 ntBASIC0.26□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.58-201ENST00000362807 102 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.154-201ENST00000363624 102 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNY3P1-201ENST00000365085 102 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-102P-201ENST00000384485 104 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-913P-201ENST00000390913 95 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-875P-201ENST00000516488 106 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 AP000942.4-201ENST00000604811 241 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 AC007485.1-201ENST00000616755 206 ntBASIC0.25□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.303-201ENST00000364998 94 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.356-201ENST00000365475 113 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 SNORD38B-201ENST00000384690 67 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.602-201ENST00000410535 92 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 HSPE1P25-201ENST00000455484 251 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.637-201ENST00000459424 114 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-475P-201ENST00000516073 104 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 C8orf59P2-201ENST00000603441 271 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 MIR376A1-201ENST00000616574 68 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 SNORD38B-202ENST00000625943 69 ntBASIC0.24□□□□□ -2.37
NUDCD3Q8IVD9 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 SNORD115-28-201ENST00000363931 81 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 RNU6-1138P-201ENST00000365359 106 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 MTCO1P5-201ENST00000433573 344 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 RNU7-73P-201ENST00000458743 63 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 AC008608.1-201ENST00000603910 127 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 MIR8055-201ENST00000610739 97 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 AC013791.1-201ENST00000616619 62 ntBASIC0.23□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.14-201ENST00000362415 103 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.197-201ENST00000364004 102 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 Y_RNA.579-201ENST00000390939 94 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 RNA5SP496-201ENST00000391240 109 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 MIR1302-11-201ENST00000408051 138 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 MIR1302-9-201ENST00000408365 138 ntBASIC0.22□□□□□ -2.37
NUDCD3Q8IVD9 SNORD100-201ENST00000408573 76 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms