Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP48Q86UV5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP48Q86UV5 RNU6-442P-201ENST00000383968 104 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 SNORA6-201ENST00000384033 151 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 RNU6-476P-201ENST00000384726 107 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 HMGN2P32-201ENST00000444648 269 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 AC108729.3-201ENST00000513484 108 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 RNU6-504P-201ENST00000516568 104 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 Y_RNA.690-201ENST00000516603 95 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 SNORD45.4-201ENST00000516629 73 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 MIR4709-201ENST00000577272 72 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 MIR4498-201ENST00000577599 66 ntBASIC2.65□□□□□ -1.99
USP48Q86UV5 MIRLET7G-201ENST00000362280 84 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 MIR1287-201ENST00000408492 90 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 RNA5SP127-201ENST00000411051 133 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 snoU13.27-201ENST00000459278 104 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 RNU7-34P-201ENST00000459394 64 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 CYCTP-201ENST00000504253 315 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 RNA5SP236-201ENST00000516169 116 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 RNU6-781P-201ENST00000516377 101 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 IGKV1-22-201ENST00000524313 326 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 MIR3129-201ENST00000581095 76 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 AC108081.1-201ENST00000604358 221 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 MIR6766-201ENST00000622641 72 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 MIR376A2-201ENST00000636782 80 ntBASIC2.64□□□□□ -1.99
USP48Q86UV5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP48Q86UV5 SNORA63.4-201ENST00000362763 126 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 RNU6-888P-201ENST00000363010 101 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 RNU6-163P-201ENST00000384396 106 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 MIRLET7F2-201ENST00000385277 83 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.63□□□□□ -1.99
USP48Q86UV5 RNU6-589P-201ENST00000516485 107 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 RNA5SP82-201ENST00000516707 92 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 MIR4781-201ENST00000585250 76 ntBASIC2.63□□□□□ -1.99
USP48Q86UV5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP48Q86UV5 SNORD77.3-201ENST00000391113 65 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 PDCD5P2-201ENST00000507570 312 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 SNORA18.4-201ENST00000516440 124 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 Y_RNA.709-201ENST00000516952 92 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 MIR6845-201ENST00000613182 61 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 MIR6132-201ENST00000622083 109 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 AC027279.3-201ENST00000625055 122 ntBASIC2.62□□□□□ -1.99
USP48Q86UV5 MIRLET7C-201ENST00000362160 84 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 SNORD58C-201ENST00000365223 64 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 RNU6-1292P-201ENST00000383856 107 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 SNORD24-201ENST00000383884 75 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 RNU6-424P-201ENST00000384367 105 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 CALM2P4-201ENST00000430810 426 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 RNA5SP57-201ENST00000459463 123 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 SNORD33.1-201ENST00000516213 88 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 SCARNA15-202ENST00000516881 127 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 SNORA31.17-201ENST00000516953 127 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 AL022345.2-201ENST00000606307 135 ntBASIC2.61□□□□□ -1.99
USP48Q86UV5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.61□□□□□ -1.99
USP48Q86UV5 MIR518F-201ENST00000384973 87 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 AL445646.1-201ENST00000431784 216 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 SNRPGP13-201ENST00000442212 177 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 AC114811.1-201ENST00000507207 168 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 AC006441.5-201ENST00000612680 209 ntBASIC2.6□□□□□ -1.99
USP48Q86UV5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.6□□□□□ -1.99
USP48Q86UV5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
USP48Q86UV5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USP48Q86UV5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USP48Q86UV5 RNA5SP276-201ENST00000362580 94 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 U8.16-201ENST00000391279 133 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.59□□□□□ -1.99
USP48Q86UV5 AC108667.1-201ENST00000428618 249 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AF228730.3-201ENST00000436691 102 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 RNU6-693P-201ENST00000516134 107 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 RNA5SP200-201ENST00000516360 103 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 RNU6-1061P-201ENST00000516530 99 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 RNA5SP168-201ENST00000516642 112 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AC133485.4-201ENST00000561835 220 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AC138907.4-201ENST00000570107 226 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 MIR5002-201ENST00000584713 97 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.59□□□□□ -1.99
USP48Q86UV5 AC021506.2-201ENST00000612354 169 ntBASIC2.59□□□□□ -1.99
USP48Q86UV5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -2
USP48Q86UV5 SNORD18B-201ENST00000365659 72 ntBASIC2.58□□□□□ -2
USP48Q86UV5 RNU6-360P-201ENST00000390944 104 ntBASIC2.58□□□□□ -2
USP48Q86UV5 RN7SKP19-201ENST00000516016 252 ntBASIC2.58□□□□□ -2
USP48Q86UV5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.58□□□□□ -2
USP48Q86UV5 MTND5P34-201ENST00000568888 325 ntBASIC2.58□□□□□ -2
USP48Q86UV5 U6.95-201ENST00000636931 70 ntBASIC2.58□□□□□ -2
USP48Q86UV5 AP000553.5-201ENST00000641933 54 ntBASIC2.58□□□□□ -2
USP48Q86UV5 RNU6-268P-201ENST00000364174 107 ntBASIC2.57□□□□□ -2
USP48Q86UV5 RNU6-647P-201ENST00000364243 107 ntBASIC2.57□□□□□ -2
USP48Q86UV5 RNU6-755P-201ENST00000364400 103 ntBASIC2.57□□□□□ -2
USP48Q86UV5 RNA5SP212-201ENST00000391223 107 ntBASIC2.57□□□□□ -2
USP48Q86UV5 AC063976.4-201ENST00000421971 163 ntBASIC2.57□□□□□ -2
USP48Q86UV5 RNU5E-3P-201ENST00000515913 68 ntBASIC2.57□□□□□ -2
USP48Q86UV5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.57□□□□□ -2
USP48Q86UV5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.57□□□□□ -2
USP48Q86UV5 AL513423.1-201ENST00000621695 132 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms