Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AP003484.1-201ENST00000530974 250 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.8□□□□□ -1.96
PRPF40BQ6NWY9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 RNU1-133P-201ENST00000364867 167 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 RNU2-7P-201ENST00000410794 178 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 HSPE1P9-201ENST00000440046 311 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 AC087499.4-201ENST00000448505 178 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 MIR219B-201ENST00000637023 88 ntBASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PRPF40BQ6NWY9 AC008555.8-201ENST00000623602 2168 ntBASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 RNU6-424P-201ENST00000384367 105 ntBASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 COX6CP6-201ENST00000490840 228 ntBASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
PRPF40BQ6NWY9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 MIR570-201ENST00000384917 97 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 MIR518A2-201ENST00000384966 87 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 RPS26P48-201ENST00000491713 339 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 RNU6-412P-201ENST00000516434 106 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 SNORA31.10-201ENST00000516482 106 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 RNA5SP402-201ENST00000517148 110 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 AC027279.3-201ENST00000625055 122 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 FO624990.1-201ENST00000636373 85 ntBASIC2.77□□□□□ -1.97
PRPF40BQ6NWY9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 RNY1P6-201ENST00000384193 109 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 U8.13-201ENST00000390842 128 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 HMGN2P39-201ENST00000398005 273 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 RNA5SP270-201ENST00000411361 118 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 SNX2P2-201ENST00000424553 323 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 RNU7-80P-201ENST00000459562 61 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 RNU6-295P-201ENST00000516901 104 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 MIR4778-201ENST00000577635 80 ntBASIC2.76□□□□□ -1.97
PRPF40BQ6NWY9 AL596211.1-201ENST00000569873 2277 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 MIR342-201ENST00000362212 99 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 RNU6-147P-201ENST00000383983 107 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 U8.17-201ENST00000391292 132 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 MIR1283-2-201ENST00000408621 87 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 RNU7-34P-201ENST00000459394 64 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 MIR3613-201ENST00000579844 87 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 AC021443.1-201ENST00000604478 211 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 AL049779.4-201ENST00000604500 156 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 MIR6766-201ENST00000622641 72 ntBASIC2.75□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.213-201ENST00000364178 111 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 RNU1-138P-201ENST00000384093 164 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 MIR520A-201ENST00000384862 85 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 MIR759-201ENST00000390224 91 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 AL627390.1-201ENST00000396055 340 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 RNY4P20-201ENST00000516678 93 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 AC007012.1-201ENST00000567192 175 ntBASIC2.74□□□□□ -1.97
PRPF40BQ6NWY9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 AP000648.3-201ENST00000623539 4507 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 MIRLET7C-201ENST00000362160 84 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.118-201ENST00000363300 101 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 U8.16-201ENST00000391279 133 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 RNU6-938P-201ENST00000411285 103 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 AL031737.1-201ENST00000450125 223 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 RNU7-12P-201ENST00000516030 62 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 RNVU1-2-201ENST00000516326 135 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 AP000942.3-201ENST00000603702 160 ntBASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRPF40BQ6NWY9 SNORA63D-201ENST00000364359 132 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 SNORA4.2-201ENST00000365313 147 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 SNORA26.9-201ENST00000391322 122 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AC015922.2-201ENST00000435593 184 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 SNORA31.11-201ENST00000516528 139 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 RNA5SP168-201ENST00000516642 112 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 MIR4679-2-201ENST00000578358 77 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 uc_338.28-201ENST00000612082 187 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AC091932.4-201ENST00000623386 200 ntBASIC2.72□□□□□ -1.97
PRPF40BQ6NWY9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PRPF40BQ6NWY9 Y_RNA.116-201ENST00000363292 103 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-833P-201ENST00000363486 107 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 SNORD12C-201ENST00000386307 89 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 SNORA48.1-201ENST00000390879 135 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 MIR1287-201ENST00000408492 90 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 MIR4446-201ENST00000578505 67 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms