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Protein–RNA interactions for Protein: Q3V6T2
CCDC88A, Girdin, human
Predictions only
Length
1,871 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CCDC88A
Q3V6T2
CR383656.4-201
ENST00000546909
122 nt
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
AC006362.1-201
ENST00000567392
174 nt
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
AC020913.3-201
ENST00000594678
125 nt
TSL 3
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
AC134878.1-201
ENST00000619901
243 nt
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
AC090582.1-201
ENST00000636321
199 nt
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR3662-201
ENST00000637030
95 nt
BASIC
-0.41
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-161P-201
ENST00000363051
106 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.536-201
ENST00000384621
113 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORD115-47-201
ENST00000391226
86 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
DLGAP5P1-201
ENST00000430307
464 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
LINC02061-201
ENST00000514225
335 nt
TSL 3
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-1194P-201
ENST00000516208
104 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
AC131281.1-201
ENST00000522984
164 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
AL512360.1-201
ENST00000555346
234 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR4491-201
ENST00000581087
68 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR3666-201
ENST00000607845
111 nt
BASIC
-0.42
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.577-201
ENST00000384794
101 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
MTCO2P27-201
ENST00000420740
428 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
AF228730.4-201
ENST00000421457
183 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU7-67P-201
ENST00000459003
62 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-437P-201
ENST00000459408
95 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU7-149P-201
ENST00000516739
59 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
AL662814.1-201
ENST00000617364
121 nt
BASIC
-0.43
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-509P-201
ENST00000363519
107 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORA1.1-201
ENST00000364671
133 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AL603910.2-201
ENST00000407268
136 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-1165P-201
ENST00000410119
107 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-735P-201
ENST00000410612
107 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
MTND4P28-201
ENST00000426217
387 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC087499.4-201
ENST00000448505
178 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-835P-201
ENST00000516974
104 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC007751.1-201
ENST00000529260
376 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC084365.1-201
ENST00000552470
310 nt
TSL 3
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.757-201
ENST00000578934
114 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU1-29P-201
ENST00000606574
126 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR6128-201
ENST00000615528
109 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
uc_338.36-201
ENST00000622331
158 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
LRRIQ3-204
ENST00000395089
2673 nt
APPRIS P2
TSL 5
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-99P-201
ENST00000364721
107 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNA5SP300-201
ENST00000391197
107 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-510P-201
ENST00000391239
108 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC092608.1-201
ENST00000503505
267 nt
TSL 2
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC026782.1-201
ENST00000512952
449 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.693-201
ENST00000516641
110 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
RNA5SP47-201
ENST00000517230
109 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC100767.1-201
ENST00000528178
123 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC145350.1-201
ENST00000567426
208 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC024933.1-201
ENST00000608472
348 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
5S_rRNA.15-201
ENST00000611169
127 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC010205.1-201
ENST00000616668
449 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
AC024614.3-201
ENST00000637860
256 nt
BASIC
-0.44
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.157-201
ENST00000363638
102 nt
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.488-201
ENST00000384403
102 nt
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
AC096531.1-201
ENST00000419107
107 nt
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
LINC02238-202
ENST00000436262
320 nt
TSL 3
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
AC024405.2-202
ENST00000532731
184 nt
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR548AZ-201
ENST00000616567
95 nt
BASIC
-0.45
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORD115-28-201
ENST00000363931
81 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.329-201
ENST00000365209
107 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.359-201
ENST00000365498
102 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.409-201
ENST00000383990
98 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-483P-201
ENST00000384088
108 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORA27-201
ENST00000384323
126 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR1278-201
ENST00000408753
81 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
AC236972.2-201
ENST00000434979
310 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
AL160162.1-201
ENST00000456715
442 nt
TSL 3
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-693P-201
ENST00000516134
107 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
RNY1P9-201
ENST00000532431
109 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR3942-201
ENST00000585264
109 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-949P-201
ENST00000384040
107 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR1468-201
ENST00000410600
86 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
AC023449.1-201
ENST00000454464
154 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
AC090617.10-201
ENST00000624308
134 nt
BASIC
-0.46
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR548A2-201
ENST00000384956
97 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR501-201
ENST00000390204
84 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORA75.1-201
ENST00000391130
148 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORD93-201
ENST00000408813
74 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
Y_RNA.617-201
ENST00000410920
90 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU7-87P-201
ENST00000459343
62 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
SNORD126-201
ENST00000459475
77 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
AC107297.1-201
ENST00000459991
176 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-408P-201
ENST00000515910
100 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-126P-201
ENST00000516685
103 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RNU6-765P-201
ENST00000516916
99 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR5701-3-201
ENST00000578890
82 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR5701-1-201
ENST00000585138
82 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
ST7-AS1_1.1-201
ENST00000611142
116 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
AC006157.1-201
ENST00000611750
366 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RN7SL660P-201
ENST00000614852
299 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
MIR5701-2-201
ENST00000615634
82 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
AL391262.2-201
ENST00000622466
494 nt
BASIC
-0.47
□□□□□ -2.48
CCDC88A
Q3V6T2
RPL21P38-201
ENST00000418090
167 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
RPS29P24-201
ENST00000486345
171 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
RNU6-314P-201
ENST00000516574
104 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
LINC02277-202
ENST00000556472
453 nt
TSL 3
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
MIR7107-201
ENST00000611489
80 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
AL391099.1-201
ENST00000624635
187 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
AL162726.3-218
ENST00000636401
95 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
RNU6-874P-201
ENST00000362390
105 nt
BASIC
-0.48
□□□□□ -2.49
CCDC88A
Q3V6T2
Y_RNA.27-201
ENST00000362540
103 nt
BASIC
-0.48
□□□□□ -2.49
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