Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RPL21P38-201ENST00000418090 167 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 AC244098.3-201ENST00000424803 96 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 uc_338.4-201ENST00000616635 176 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 AC243994.1-201ENST00000618627 109 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 AL160413.1-201ENST00000622780 310 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 SNORA1.2-201ENST00000365189 134 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 RNU6-396P-201ENST00000365369 105 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 SNORA22B-201ENST00000383876 138 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 RNU6-144P-201ENST00000383951 107 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 RNU6-662P-201ENST00000384253 104 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 RNU6-101P-201ENST00000410323 104 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 MTND4LP11-201ENST00000422184 280 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 AC023449.1-201ENST00000454464 154 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 Y_RNA.631-201ENST00000459607 101 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 AC091959.1-201ENST00000495857 238 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 SCARNA8-201ENST00000515924 131 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 Y_RNA.666-201ENST00000516187 112 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.5□□□□□ -2.33
RFX4Q33E94 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
RFX4Q33E94 Y_RNA.216-201ENST00000364205 93 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 RNU6-580P-201ENST00000365159 107 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 RNU6-205P-201ENST00000390858 107 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 RNU6-847P-201ENST00000411115 108 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 BTF3P11-201ENST00000426582 477 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.49□□□□□ -2.33
RFX4Q33E94 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 MIR5692C2-201ENST00000577959 77 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 AL008718.3-201ENST00000610217 321 ntBASIC0.49□□□□□ -2.33
RFX4Q33E94 MIR377-201ENST00000362145 69 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.16-201ENST00000362421 102 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.217-201ENST00000364214 105 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 RNU6-1138P-201ENST00000365359 106 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 SNORA24-201ENST00000384096 131 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.486-201ENST00000384398 107 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.527-201ENST00000384573 102 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 RNA5SP247-201ENST00000411181 105 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 RNU6-938P-201ENST00000411285 103 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC015818.7-201ENST00000428754 109 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC087499.7-201ENST00000441958 109 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.641-201ENST00000459414 105 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
RFX4Q33E94 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 RNU2-31P-201ENST00000516954 155 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.711-201ENST00000516993 102 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.721-201ENST00000517207 102 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC131281.1-201ENST00000522984 164 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AC113195.1-201ENST00000579952 141 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 AL512605.2-201ENST00000592972 256 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 MIR6734-201ENST00000621166 68 ntBASIC0.48□□□□□ -2.33
RFX4Q33E94 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
RFX4Q33E94 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
RFX4Q33E94 Y_RNA.19-201ENST00000362462 99 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNU6-770P-201ENST00000363929 105 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNU4-10P-201ENST00000364383 140 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 Y_RNA.380-201ENST00000365663 111 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
RFX4Q33E94 RNU6-42P-201ENST00000384165 107 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 MT-TN-201ENST00000387400 73 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNA5SP496-201ENST00000391240 109 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 SNORD77.4-201ENST00000516158 81 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 RNU6-988P-201ENST00000519081 107 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.47□□□□□ -2.33
RFX4Q33E94 AP001094.1-201ENST00000579805 193 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.47□□□□□ -2.33
RFX4Q33E94 AC242498.1-201ENST00000604134 111 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 uc_338.6-201ENST00000613544 171 ntBASIC0.47□□□□□ -2.33
RFX4Q33E94 MIR1-1-201ENST00000362147 71 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 Y_RNA.64-201ENST00000362845 102 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 Y_RNA.128-201ENST00000363391 112 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 Y_RNA.210-201ENST00000364161 110 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 RNU6-326P-201ENST00000365480 107 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 Y_RNA.535-201ENST00000384612 99 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 Y_RNA.572-201ENST00000384757 98 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 MIR548A2-201ENST00000384956 97 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 MIR518F-201ENST00000384973 87 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 SNORD83.1-201ENST00000411362 77 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 MTND5P22-201ENST00000458380 195 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 MTCO2P24-201ENST00000515611 426 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 SNORA40.15-201ENST00000516884 107 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 RNU6-1137P-201ENST00000517073 99 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.46□□□□□ -2.34
RFX4Q33E94 MIR4724-201ENST00000579485 89 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 MIR4680-201ENST00000580906 66 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 RMST_2.1-201ENST00000617263 136 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 snoU18.1-201ENST00000629629 71 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 AC134503.1-201ENST00000633048 54 ntBASIC0.46□□□□□ -2.34
RFX4Q33E94 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RFX4Q33E94 MIR367-201ENST00000362299 68 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORA25.1-201ENST00000362326 128 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.14-201ENST00000362415 103 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms