Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC007742.2-201ENST00000618226 398 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC090971.5-201ENST00000621102 293 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC090574.1-201ENST00000623186 233 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SMARCB1Q12824 snoU2_19.2-201ENST00000363024 80 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 Y_RNA.183-201ENST00000363882 113 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 SNORA51.10-201ENST00000384418 136 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 RNU6-125P-201ENST00000384505 107 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 MIR215-201ENST00000384858 110 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 Y_RNA.581-201ENST00000391017 97 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 RPL21P38-201ENST00000418090 167 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 AC007751.1-201ENST00000529260 376 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.52□□□□□ -2.33
SMARCB1Q12824 MIR2681-201ENST00000581814 105 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
SMARCB1Q12824 RNU6-899P-201ENST00000363947 107 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.370-201ENST00000365589 108 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.537-201ENST00000384626 109 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.541-201ENST00000384640 113 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.547-201ENST00000384654 119 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.569-201ENST00000384749 103 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 MIR802-201ENST00000390235 94 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 MIR548O-201ENST00000408583 114 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 MIR1252-201ENST00000408861 65 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 ELOCP20-201ENST00000422460 345 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 AC015818.7-201ENST00000428754 109 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 AC087499.7-201ENST00000441958 109 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.51□□□□□ -2.33
SMARCB1Q12824 AC013791.1-201ENST00000616619 62 ntBASIC0.51□□□□□ -2.33
SMARCB1Q12824 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SMARCB1Q12824 Y_RNA.28-201ENST00000362554 111 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 Y_RNA.36-201ENST00000362602 112 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 RNU4-90P-201ENST00000362773 141 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 Y_RNA.138-201ENST00000363462 102 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 Y_RNA.168-201ENST00000363740 102 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 SNORA63.7-201ENST00000365579 123 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 RNU6-994P-201ENST00000410507 111 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 AC005534.2-201ENST00000431047 433 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 RNU7-149P-201ENST00000516739 59 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 uc_338.6-201ENST00000613544 171 ntBASIC0.5□□□□□ -2.33
SMARCB1Q12824 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.5□□□□□ -2.33
SMARCB1Q12824 RNU6-1272P-201ENST00000362776 107 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNU6-1205P-201ENST00000363625 106 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 Y_RNA.214-201ENST00000364201 112 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 Y_RNA.216-201ENST00000364205 93 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNU4-10P-201ENST00000364383 140 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNU6-580P-201ENST00000365159 107 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 Y_RNA.466-201ENST00000384294 113 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNU6-205P-201ENST00000390858 107 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 Y_RNA.666-201ENST00000516187 112 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 MIR2115-201ENST00000516657 100 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 RNA5SP480-201ENST00000516840 109 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.49□□□□□ -2.33
SMARCB1Q12824 AL008718.3-201ENST00000610217 321 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 AL160413.1-201ENST00000622780 310 ntBASIC0.49□□□□□ -2.33
SMARCB1Q12824 Y_RNA.16-201ENST00000362421 102 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU6-290P-201ENST00000365212 101 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU6-396P-201ENST00000365369 105 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 SNORA22B-201ENST00000383876 138 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU6-662P-201ENST00000384253 104 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 MIR548A2-201ENST00000384956 97 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU6-1248P-201ENST00000391096 64 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU6-938P-201ENST00000411285 103 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 BTF3P11-201ENST00000426582 477 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC091959.1-201ENST00000495857 238 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
SMARCB1Q12824 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC025627.3-201ENST00000582078 182 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.48□□□□□ -2.33
SMARCB1Q12824 uc_338.4-201ENST00000616635 176 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 AC243994.1-201ENST00000618627 109 ntBASIC0.48□□□□□ -2.33
SMARCB1Q12824 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SMARCB1Q12824 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 Y_RNA.389-201ENST00000383924 113 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 SNORA24-201ENST00000384096 131 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 Y_RNA.486-201ENST00000384398 107 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 Y_RNA.572-201ENST00000384757 98 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 SNORD83.1-201ENST00000411362 77 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 MTND5P22-201ENST00000458380 195 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 Y_RNA.631-201ENST00000459607 101 ntBASIC0.47□□□□□ -2.33
SMARCB1Q12824 RNU6-1137P-201ENST00000517073 99 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 1228 ms