Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SNORD115-36-201ENST00000365629 82 ntBASIC0.22□□□□□ -2.37
CBX1P83916 Y_RNA.526-201ENST00000384572 110 ntBASIC0.22□□□□□ -2.37
CBX1P83916 BTF3P11-201ENST00000426582 477 ntBASIC0.22□□□□□ -2.37
CBX1P83916 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
CBX1P83916 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
CBX1P83916 MIR4711-201ENST00000578274 70 ntBASIC0.22□□□□□ -2.37
CBX1P83916 SNORD115-40-201ENST00000606510 82 ntBASIC0.22□□□□□ -2.37
CBX1P83916 SNORD113-5-201ENST00000607261 78 ntBASIC0.22□□□□□ -2.37
CBX1P83916 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CBX1P83916 AC022709.1-201ENST00000615967 87 ntBASIC0.22□□□□□ -2.37
CBX1P83916 AC104985.2-201ENST00000620598 500 ntBASIC0.22□□□□□ -2.37
CBX1P83916 AC022140.2-201ENST00000623500 188 ntBASIC0.22□□□□□ -2.37
CBX1P83916 RNU1-115P-201ENST00000365329 160 ntBASIC0.21□□□□□ -2.38
CBX1P83916 SNORD71-201ENST00000411292 86 ntBASIC0.21□□□□□ -2.38
CBX1P83916 AC138393.2-201ENST00000414742 246 ntBASIC0.21□□□□□ -2.38
CBX1P83916 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.21□□□□□ -2.38
CBX1P83916 RNU7-152P-201ENST00000458982 64 ntBASIC0.21□□□□□ -2.38
CBX1P83916 RNU6-1170P-201ENST00000515974 106 ntBASIC0.21□□□□□ -2.38
CBX1P83916 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
CBX1P83916 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
CBX1P83916 Y_RNA.286-201ENST00000364813 102 ntBASIC0.2□□□□□ -2.38
CBX1P83916 RNU6-144P-201ENST00000383951 107 ntBASIC0.2□□□□□ -2.38
CBX1P83916 SNORD38B-201ENST00000384690 67 ntBASIC0.2□□□□□ -2.38
CBX1P83916 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
CBX1P83916 SNORD100-201ENST00000408573 76 ntBASIC0.2□□□□□ -2.38
CBX1P83916 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
CBX1P83916 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.2□□□□□ -2.38
CBX1P83916 MIR18B-201ENST00000454574 71 ntBASIC0.2□□□□□ -2.38
CBX1P83916 RNU7-149P-201ENST00000516739 59 ntBASIC0.2□□□□□ -2.38
CBX1P83916 RNU6-958P-201ENST00000516995 106 ntBASIC0.2□□□□□ -2.38
CBX1P83916 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
CBX1P83916 uc_338.6-201ENST00000613544 171 ntBASIC0.2□□□□□ -2.38
CBX1P83916 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.2□□□□□ -2.38
CBX1P83916 SNORD38B-202ENST00000625943 69 ntBASIC0.2□□□□□ -2.38
CBX1P83916 AC010332.2-201ENST00000613083 1904 ntBASIC0.2□□□□□ -2.38
CBX1P83916 RNU6-1205P-201ENST00000363625 106 ntBASIC0.19□□□□□ -2.38
CBX1P83916 Y_RNA.252-201ENST00000364556 101 ntBASIC0.19□□□□□ -2.38
CBX1P83916 Y_RNA.471-201ENST00000384312 102 ntBASIC0.19□□□□□ -2.38
CBX1P83916 RNU6-364P-201ENST00000384387 107 ntBASIC0.19□□□□□ -2.38
CBX1P83916 Y_RNA.494-201ENST00000384432 111 ntBASIC0.19□□□□□ -2.38
CBX1P83916 RNU6-308P-201ENST00000390957 107 ntBASIC0.19□□□□□ -2.38
CBX1P83916 Y_RNA.619-201ENST00000410951 90 ntBASIC0.19□□□□□ -2.38
CBX1P83916 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
CBX1P83916 RNU6-191P-201ENST00000516295 94 ntBASIC0.19□□□□□ -2.38
CBX1P83916 AC090897.1-201ENST00000580909 226 ntBASIC0.19□□□□□ -2.38
CBX1P83916 AP000942.4-201ENST00000604811 241 ntBASIC0.19□□□□□ -2.38
CBX1P83916 SNORD58B-201ENST00000607313 66 ntBASIC0.19□□□□□ -2.38
CBX1P83916 AL132765.2-201ENST00000610812 351 ntBASIC0.19□□□□□ -2.38
CBX1P83916 MIR6740-201ENST00000618268 113 ntBASIC0.19□□□□□ -2.38
CBX1P83916 AC099654.14-201ENST00000638599 341 ntBASIC0.19□□□□□ -2.38
CBX1P83916 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
CBX1P83916 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
CBX1P83916 Y_RNA.813-201ENST00000364639 102 ntBASIC0.18□□□□□ -2.38
CBX1P83916 Y_RNA.508-201ENST00000384502 114 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-1319P-201ENST00000390855 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-747P-201ENST00000390928 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-241P-201ENST00000391148 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-447P-201ENST00000410293 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-1118P-201ENST00000410382 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-1076P-201ENST00000410397 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-355P-201ENST00000410427 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-791P-201ENST00000410467 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-705P-201ENST00000410601 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-1100P-201ENST00000410691 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-860P-201ENST00000410860 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-1217P-201ENST00000411276 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU6-785P-201ENST00000411324 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 AC087499.4-201ENST00000448505 178 ntBASIC0.18□□□□□ -2.38
CBX1P83916 RNU7-73P-201ENST00000458743 63 ntBASIC0.18□□□□□ -2.38
CBX1P83916 U6.90-201ENST00000614007 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 U6.70-201ENST00000620287 104 ntBASIC0.18□□□□□ -2.38
CBX1P83916 uc_338.16-201ENST00000621804 95 ntBASIC0.18□□□□□ -2.38
CBX1P83916 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
CBX1P83916 SNORD115-28-201ENST00000363931 81 ntBASIC0.17□□□□□ -2.38
CBX1P83916 Y_RNA.355-201ENST00000365462 98 ntBASIC0.17□□□□□ -2.38
CBX1P83916 MIR518F-201ENST00000384973 87 ntBASIC0.17□□□□□ -2.38
CBX1P83916 MIR125B2-201ENST00000385128 89 ntBASIC0.17□□□□□ -2.38
CBX1P83916 RNU7-102P-201ENST00000458948 62 ntBASIC0.17□□□□□ -2.38
CBX1P83916 Y_RNA.632-201ENST00000459189 102 ntBASIC0.17□□□□□ -2.38
CBX1P83916 Y_RNA.666-201ENST00000516187 112 ntBASIC0.17□□□□□ -2.38
CBX1P83916 RNA5SP94-201ENST00000516917 108 ntBASIC0.17□□□□□ -2.38
CBX1P83916 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.17□□□□□ -2.38
CBX1P83916 Z97988.1-201ENST00000637697 135 ntBASIC0.17□□□□□ -2.38
CBX1P83916 Y_RNA.80-201ENST00000362996 102 ntBASIC0.16□□□□□ -2.38
CBX1P83916 Y_RNA.222-201ENST00000364264 102 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU6-1138P-201ENST00000365359 106 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CBX1P83916 Y_RNA.485-201ENST00000384395 102 ntBASIC0.16□□□□□ -2.38
CBX1P83916 MIR588-201ENST00000384900 83 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU6-913P-201ENST00000390913 95 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNA5SP496-201ENST00000391240 109 ntBASIC0.16□□□□□ -2.38
CBX1P83916 MIR1257-201ENST00000408490 117 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU6-1165P-201ENST00000410119 107 ntBASIC0.16□□□□□ -2.38
CBX1P83916 MTCO1P5-201ENST00000433573 344 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU6-976P-201ENST00000516086 111 ntBASIC0.16□□□□□ -2.38
CBX1P83916 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
CBX1P83916 RNU7-53P-201ENST00000516705 60 ntBASIC0.16□□□□□ -2.38
CBX1P83916 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms