Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR4636-201ENST00000582271 80 ntBASIC-0.93□□□□□ -2.56
HIST1H3AP68431 AC245008.1-201ENST00000608123 476 ntBASIC-0.93□□□□□ -2.56
HIST1H3AP68431 AC084368.1-201ENST00000620935 65 ntBASIC-0.93□□□□□ -2.56
HIST1H3AP68431 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.93□□□□□ -2.56
HIST1H3AP68431 AC068137.3-201ENST00000639191 341 ntBASIC-0.93□□□□□ -2.56
HIST1H3AP68431 MIR101-2-201ENST00000362195 79 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 RNA5SP237-201ENST00000410414 113 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 RNU6-710P-201ENST00000410424 105 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 AC108059.2-201ENST00000434626 151 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.94□□□□□ -2.56
HIST1H3AP68431 MTND3P3-201ENST00000505004 126 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 RNU6-966P-201ENST00000516479 104 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 AC005014.2-201ENST00000607795 599 ntBASIC-0.94□□□□□ -2.56
HIST1H3AP68431 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.95□□□□□ -2.56
HIST1H3AP68431 U8.6-201ENST00000364939 135 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 SNORA22B-201ENST00000383876 138 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 RNU6-926P-201ENST00000384075 107 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.95□□□□□ -2.56
HIST1H3AP68431 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.95□□□□□ -2.56
HIST1H3AP68431 RN7SKP298-201ENST00000515950 94 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 RNA5SP169-201ENST00000517268 117 ntBASIC-0.95□□□□□ -2.56
HIST1H3AP68431 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 MIR604-201ENST00000384880 94 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 U8.15-201ENST00000390947 134 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 RNU2-11P-201ENST00000459191 187 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 RNU6-470P-201ENST00000515954 104 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 MIR4491-201ENST00000581087 68 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 AC060780.3-201ENST00000589464 80 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 AP001282.2-201ENST00000616149 309 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 AL162376.1-201ENST00000624117 175 ntBASIC-0.96□□□□□ -2.56
HIST1H3AP68431 RNU6-490P-201ENST00000362985 107 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNA5SP98-201ENST00000363158 137 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNU6-726P-201ENST00000364680 107 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 SNORA40.5-201ENST00000391061 128 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 MIR876-201ENST00000401147 81 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNU6-437P-201ENST00000459408 95 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RPS29P24-201ENST00000486345 171 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNU7-115P-201ENST00000516433 55 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RNU6-273P-201ENST00000516937 96 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 AC007751.1-201ENST00000529260 376 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 AC018462.2-201ENST00000605375 395 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 RN7SL660P-201ENST00000614852 299 ntBASIC-0.97□□□□□ -2.56
HIST1H3AP68431 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
HIST1H3AP68431 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 SNORA27-201ENST00000384323 126 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 AP003072.1-201ENST00000531740 145 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.98□□□□□ -2.57
HIST1H3AP68431 MIR6128-201ENST00000615528 109 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 AL662814.1-201ENST00000617364 121 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 MIR548AY-201ENST00000617669 107 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 AL603755.1-201ENST00000619504 163 ntBASIC-0.98□□□□□ -2.57
HIST1H3AP68431 RNA5SP245-201ENST00000364239 121 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 SNORA1-201ENST00000384107 130 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 MT-TQ-201ENST00000387372 72 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 MIR548I3-201ENST00000408378 149 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 AL445567.1-201ENST00000439121 144 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 SEPT14P3-201ENST00000439401 183 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 AL732372.2-207ENST00000445840 183 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 SEPT14P2-201ENST00000453405 183 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.99□□□□□ -2.57
HIST1H3AP68431 RPL7P42-201ENST00000481005 679 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 SEPT14P4-201ENST00000513445 186 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 FO082796.1-201ENST00000523795 183 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 AL080274.1-201ENST00000605565 220 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 AC087752.4-201ENST00000605911 462 ntBASIC-0.99□□□□□ -2.57
HIST1H3AP68431 SNORD114-14-201ENST00000362723 75 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 RNU4-73P-201ENST00000363164 141 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 RNU6-674P-201ENST00000363831 107 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 AL590004.1-201ENST00000405321 300 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 SNORD11-201ENST00000459124 84 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1□□□□□ -2.57
HIST1H3AP68431 RNU6-1194P-201ENST00000516208 104 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 AC024933.1-201ENST00000608472 348 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 DISC2.1-201ENST00000612827 205 ntBASIC-1□□□□□ -2.57
HIST1H3AP68431 AL596211.1-201ENST00000569873 2277 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD115-28-201ENST00000363931 81 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD116-9-201ENST00000384000 95 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD116-3-201ENST00000384287 95 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD116-8-201ENST00000384365 95 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD116-7-201ENST00000384404 95 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD116-5-201ENST00000384462 95 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 MIR516B1-201ENST00000385211 90 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 SNORD5.1-201ENST00000458800 75 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 RNA5SP66-201ENST00000517178 101 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms