Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-626P-201ENST00000363354 107 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 SNORA63.5-201ENST00000363548 123 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-597P-201ENST00000365620 102 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-811P-201ENST00000384069 107 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 SNORA75-201ENST00000384158 137 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-332P-201ENST00000391193 108 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 AC244250.2-201ENST00000418731 148 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.55□□□□□ -2.5
FOXA3P55318 SNORD5.1-201ENST00000458800 75 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 SNORD11-201ENST00000459124 84 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RNU6-437P-201ENST00000459408 95 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 RPS29P24-201ENST00000486345 171 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.55□□□□□ -2.5
FOXA3P55318 RNA5SP285-201ENST00000516619 119 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 SNORA25.16-201ENST00000516741 121 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 AC007751.1-201ENST00000529260 376 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.55□□□□□ -2.5
FOXA3P55318 AC087752.4-201ENST00000605911 462 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.55□□□□□ -2.5
FOXA3P55318 AL662814.1-201ENST00000617364 121 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 MIR548AY-201ENST00000617669 107 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 MIR6863-201ENST00000636112 90 ntBASIC-0.55□□□□□ -2.5
FOXA3P55318 MIR655-201ENST00000362159 97 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 SNORD115-24-201ENST00000363528 82 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 SNORD115-28-201ENST00000363931 81 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU4-50P-201ENST00000364361 141 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR548I3-201ENST00000408378 149 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU6-710P-201ENST00000410424 105 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU6-938P-201ENST00000411285 103 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 AC096949.1-201ENST00000412047 152 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.56□□□□□ -2.5
FOXA3P55318 AF228730.4-201ENST00000421457 183 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU2-11P-201ENST00000459191 187 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RPL7P42-201ENST00000481005 679 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 AP001180.6-201ENST00000584918 159 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 AL080274.1-201ENST00000605565 220 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 uc_338.28-201ENST00000612082 187 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR1244-1-201ENST00000612829 85 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR6507-201ENST00000613630 70 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR1244-3-201ENST00000635744 85 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR1244-2-201ENST00000636449 85 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR1244-4-202ENST00000636813 85 ntBASIC-0.56□□□□□ -2.5
FOXA3P55318 MIR101-2-201ENST00000362195 79 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 MIR342-201ENST00000362212 99 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 RNU6-490P-201ENST00000362985 107 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 RNA5SP205-201ENST00000364653 136 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORD116-9-201ENST00000384000 95 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORD116-3-201ENST00000384287 95 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORD116-8-201ENST00000384365 95 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORD116-7-201ENST00000384404 95 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORD116-5-201ENST00000384462 95 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORA8.3-201ENST00000384679 139 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SNORA36B-201ENST00000410438 131 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 MTND4LP11-201ENST00000422184 280 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SEPT14P3-201ENST00000439401 183 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 AL732372.2-207ENST00000445840 183 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SEPT14P2-201ENST00000453405 183 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 RNU7-45P-201ENST00000459460 63 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 SEPT14P4-201ENST00000513445 186 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 FO082796.1-201ENST00000523795 183 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 MIR4432-201ENST00000581823 84 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 DISC2.1-201ENST00000612827 205 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 AL603755.1-201ENST00000619504 163 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 AC022960.3-201ENST00000619794 441 ntBASIC-0.57□□□□□ -2.5
FOXA3P55318 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 SNORA25.7-201ENST00000364375 127 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 U8.6-201ENST00000364939 135 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 SNORA1-201ENST00000384107 130 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 SNORD77.3-201ENST00000391113 65 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 MTCO3P40-201ENST00000392516 676 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AC098826.2-201ENST00000452011 651 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 SNORD36C-201ENST00000516733 66 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AL512360.1-201ENST00000555346 234 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AL590491.3-201ENST00000610731 82 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AC122108.2-201ENST00000611946 526 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AC073114.1-201ENST00000612027 490 ntBASIC-0.58□□□□□ -2.5
FOXA3P55318 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.59□□□□□ -2.5
FOXA3P55318 AL596211.1-201ENST00000569873 2277 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 MIR516B1-201ENST00000385211 90 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 MIR876-201ENST00000401147 81 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 SNORD110-201ENST00000408189 75 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC074085.1-201ENST00000413598 418 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 BX276092.1-201ENST00000427368 251 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.59□□□□□ -2.5
FOXA3P55318 FCF1P4-201ENST00000448326 183 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms