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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
TRMT112P2-201
ENST00000512910
132 nt
BASIC
1.01
□□□□□ -2.25
CDH13
P55290
SCARNA8-201
ENST00000515924
131 nt
BASIC
1.01
□□□□□ -2.25
CDH13
P55290
AC087362.2-201
ENST00000529325
256 nt
TSL 3
BASIC
1.01
□□□□□ -2.25
CDH13
P55290
AL122017.1-202
ENST00000570612
319 nt
TSL 5
BASIC
1.01
□□□□□ -2.25
CDH13
P55290
SNORA25.3-201
ENST00000363205
127 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
Y_RNA.117-201
ENST00000363294
101 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
RNU6-392P-201
ENST00000364926
101 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
Y_RNA.483-201
ENST00000384380
101 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
Y_RNA.547-201
ENST00000384654
119 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
MIR548O-201
ENST00000408583
114 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
RNU6-321P-201
ENST00000410912
106 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
RNU6-847P-201
ENST00000411115
108 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
RNU2-55P-201
ENST00000411146
174 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
AL392103.1-201
ENST00000447000
198 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
AC005840.1-201
ENST00000498412
377 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
RNU2-13P-201
ENST00000515909
113 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
AC100767.1-201
ENST00000528178
123 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
MIR4282-201
ENST00000583613
67 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
MIR4295-201
ENST00000585286
85 nt
BASIC
1
□□□□□ -2.25
CDH13
P55290
MGAT4C-209
ENST00000611864
25116 nt
APPRIS P1
TSL 5
BASIC
1
□□□□□ -2.25
CDH13
P55290
Y_RNA.24-201
ENST00000362508
103 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNY3P5-201
ENST00000384127
102 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNU6-472P-201
ENST00000384299
107 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
Y_RNA.587-201
ENST00000391210
103 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
LINC01866-201
ENST00000421181
201 nt
TSL 3
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
AC095059.1-201
ENST00000502570
349 nt
TSL 5
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
UBL5P1-201
ENST00000507979
193 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNU4ATAC11P-201
ENST00000515939
126 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNU7-25P-201
ENST00000516544
62 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNU7-181P-201
ENST00000517234
74 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
MIR4661-201
ENST00000582720
75 nt
BASIC
0.99
□□□□□ -2.25
CDH13
P55290
RNY1P10-201
ENST00000363268
113 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
Y_RNA.149-201
ENST00000363558
117 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
Y_RNA.229-201
ENST00000364347
113 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
SNORD24-201
ENST00000383884
75 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
Y_RNA.486-201
ENST00000384398
107 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
SNORA51.10-201
ENST00000384418
136 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
Y_RNA.590-201
ENST00000410140
107 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
AL358176.2-201
ENST00000425769
204 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
AC087499.4-201
ENST00000448505
178 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
AC107297.1-201
ENST00000459991
176 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
MIR4719-201
ENST00000585233
84 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
AC091895.1-201
ENST00000624494
256 nt
BASIC
0.98
□□□□□ -2.25
CDH13
P55290
MIR337-201
ENST00000362281
93 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
RNU4-10P-201
ENST00000364383
140 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
RNU4-38P-201
ENST00000364472
129 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
Y_RNA.304-201
ENST00000365011
112 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
Y_RNA.352-201
ENST00000365439
102 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
Y_RNA.459-201
ENST00000384251
102 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
SNORA26-201
ENST00000391286
122 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
MIR1302-7-201
ENST00000408841
72 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
SNORD124-201
ENST00000459577
104 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
AC087343.1-201
ENST00000477341
475 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
Y_RNA.666-201
ENST00000516187
112 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
RNU6-365P-201
ENST00000517113
106 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
AC109810.1-201
ENST00000534066
224 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
MIR4791-201
ENST00000607666
84 nt
BASIC
0.97
□□□□□ -2.25
CDH13
P55290
ZNF260-205
ENST00000593142
4047 nt
APPRIS P1
TSL 1 (best)
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-34-201
ENST00000362441
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-12-201
ENST00000362583
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
Y_RNA.47-201
ENST00000362697
108 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-29-201
ENST00000362834
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-9-201
ENST00000362912
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-21-201
ENST00000362963
81 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-14-201
ENST00000363090
81 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
Y_RNA.122-201
ENST00000363331
96 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-13-201
ENST00000363358
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-41-201
ENST00000363608
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-11-201
ENST00000363616
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-5-201
ENST00000363633
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-39-201
ENST00000363694
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-4-201
ENST00000363810
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-16-201
ENST00000363887
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-6-201
ENST00000363942
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-42-201
ENST00000364273
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-15-201
ENST00000364809
81 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-1-201
ENST00000364961
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-26-201
ENST00000365067
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-10-201
ENST00000365073
81 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
Y_RNA.330-201
ENST00000365230
109 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-43-201
ENST00000365503
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-36-201
ENST00000365629
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
Y_RNA.679-201
ENST00000516416
91 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-40-201
ENST00000606510
82 nt
BASIC
0.96
□□□□□ -2.26
CDH13
P55290
SNORD115-28-201
ENST00000363931
81 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
RNU6-1187P-201
ENST00000364771
110 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
RNU6-53P-201
ENST00000365367
106 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
SNORA24-201
ENST00000384096
131 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
Y_RNA.556-201
ENST00000384677
113 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
FABP5P4-201
ENST00000437203
171 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
RNU6-504P-201
ENST00000516568
104 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
MIR2115-201
ENST00000516657
100 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
AC007751.1-201
ENST00000529260
376 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
AC131055.1-201
ENST00000584626
316 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
AC243994.1-201
ENST00000618627
109 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
MTND1P7-201
ENST00000632801
297 nt
BASIC
0.95
□□□□□ -2.26
CDH13
P55290
RNU6-396P-201
ENST00000365369
105 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
Y_RNA.572-201
ENST00000384757
98 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
MIR570-201
ENST00000384917
97 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
MIR616-201
ENST00000385293
97 nt
BASIC
0.94
□□□□□ -2.26
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Retrieved 100 of 98,524 protein–RNA pairs in 279.2 ms