Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TRMT112P2-201ENST00000512910 132 ntBASIC1.01□□□□□ -2.25
CDH13P55290 SCARNA8-201ENST00000515924 131 ntBASIC1.01□□□□□ -2.25
CDH13P55290 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH13P55290 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH13P55290 SNORA25.3-201ENST00000363205 127 ntBASIC1□□□□□ -2.25
CDH13P55290 Y_RNA.117-201ENST00000363294 101 ntBASIC1□□□□□ -2.25
CDH13P55290 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
CDH13P55290 Y_RNA.483-201ENST00000384380 101 ntBASIC1□□□□□ -2.25
CDH13P55290 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
CDH13P55290 MIR548O-201ENST00000408583 114 ntBASIC1□□□□□ -2.25
CDH13P55290 RNU6-321P-201ENST00000410912 106 ntBASIC1□□□□□ -2.25
CDH13P55290 RNU6-847P-201ENST00000411115 108 ntBASIC1□□□□□ -2.25
CDH13P55290 RNU2-55P-201ENST00000411146 174 ntBASIC1□□□□□ -2.25
CDH13P55290 AL392103.1-201ENST00000447000 198 ntBASIC1□□□□□ -2.25
CDH13P55290 AC005840.1-201ENST00000498412 377 ntBASIC1□□□□□ -2.25
CDH13P55290 RNU2-13P-201ENST00000515909 113 ntBASIC1□□□□□ -2.25
CDH13P55290 AC100767.1-201ENST00000528178 123 ntBASIC1□□□□□ -2.25
CDH13P55290 MIR4282-201ENST00000583613 67 ntBASIC1□□□□□ -2.25
CDH13P55290 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CDH13P55290 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CDH13P55290 Y_RNA.24-201ENST00000362508 103 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNY3P5-201ENST00000384127 102 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNU6-472P-201ENST00000384299 107 ntBASIC0.99□□□□□ -2.25
CDH13P55290 Y_RNA.587-201ENST00000391210 103 ntBASIC0.99□□□□□ -2.25
CDH13P55290 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH13P55290 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.99□□□□□ -2.25
CDH13P55290 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNU7-25P-201ENST00000516544 62 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNU7-181P-201ENST00000517234 74 ntBASIC0.99□□□□□ -2.25
CDH13P55290 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
CDH13P55290 RNY1P10-201ENST00000363268 113 ntBASIC0.98□□□□□ -2.25
CDH13P55290 Y_RNA.149-201ENST00000363558 117 ntBASIC0.98□□□□□ -2.25
CDH13P55290 Y_RNA.229-201ENST00000364347 113 ntBASIC0.98□□□□□ -2.25
CDH13P55290 SNORD24-201ENST00000383884 75 ntBASIC0.98□□□□□ -2.25
CDH13P55290 Y_RNA.486-201ENST00000384398 107 ntBASIC0.98□□□□□ -2.25
CDH13P55290 SNORA51.10-201ENST00000384418 136 ntBASIC0.98□□□□□ -2.25
CDH13P55290 Y_RNA.590-201ENST00000410140 107 ntBASIC0.98□□□□□ -2.25
CDH13P55290 AL358176.2-201ENST00000425769 204 ntBASIC0.98□□□□□ -2.25
CDH13P55290 AC087499.4-201ENST00000448505 178 ntBASIC0.98□□□□□ -2.25
CDH13P55290 AC107297.1-201ENST00000459991 176 ntBASIC0.98□□□□□ -2.25
CDH13P55290 MIR4719-201ENST00000585233 84 ntBASIC0.98□□□□□ -2.25
CDH13P55290 AC091895.1-201ENST00000624494 256 ntBASIC0.98□□□□□ -2.25
CDH13P55290 MIR337-201ENST00000362281 93 ntBASIC0.97□□□□□ -2.25
CDH13P55290 RNU4-10P-201ENST00000364383 140 ntBASIC0.97□□□□□ -2.25
CDH13P55290 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
CDH13P55290 Y_RNA.304-201ENST00000365011 112 ntBASIC0.97□□□□□ -2.25
CDH13P55290 Y_RNA.352-201ENST00000365439 102 ntBASIC0.97□□□□□ -2.25
CDH13P55290 Y_RNA.459-201ENST00000384251 102 ntBASIC0.97□□□□□ -2.25
CDH13P55290 SNORA26-201ENST00000391286 122 ntBASIC0.97□□□□□ -2.25
CDH13P55290 MIR1302-7-201ENST00000408841 72 ntBASIC0.97□□□□□ -2.25
CDH13P55290 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
CDH13P55290 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
CDH13P55290 Y_RNA.666-201ENST00000516187 112 ntBASIC0.97□□□□□ -2.25
CDH13P55290 RNU6-365P-201ENST00000517113 106 ntBASIC0.97□□□□□ -2.25
CDH13P55290 AC109810.1-201ENST00000534066 224 ntBASIC0.97□□□□□ -2.25
CDH13P55290 MIR4791-201ENST00000607666 84 ntBASIC0.97□□□□□ -2.25
CDH13P55290 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-34-201ENST00000362441 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-12-201ENST00000362583 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 Y_RNA.47-201ENST00000362697 108 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-29-201ENST00000362834 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-9-201ENST00000362912 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-21-201ENST00000362963 81 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-14-201ENST00000363090 81 ntBASIC0.96□□□□□ -2.26
CDH13P55290 Y_RNA.122-201ENST00000363331 96 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-13-201ENST00000363358 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-41-201ENST00000363608 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-11-201ENST00000363616 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-5-201ENST00000363633 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-39-201ENST00000363694 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-4-201ENST00000363810 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-16-201ENST00000363887 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-6-201ENST00000363942 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-42-201ENST00000364273 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-15-201ENST00000364809 81 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-1-201ENST00000364961 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-26-201ENST00000365067 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-10-201ENST00000365073 81 ntBASIC0.96□□□□□ -2.26
CDH13P55290 Y_RNA.330-201ENST00000365230 109 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-43-201ENST00000365503 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-36-201ENST00000365629 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 Y_RNA.679-201ENST00000516416 91 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-40-201ENST00000606510 82 ntBASIC0.96□□□□□ -2.26
CDH13P55290 SNORD115-28-201ENST00000363931 81 ntBASIC0.95□□□□□ -2.26
CDH13P55290 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
CDH13P55290 RNU6-53P-201ENST00000365367 106 ntBASIC0.95□□□□□ -2.26
CDH13P55290 SNORA24-201ENST00000384096 131 ntBASIC0.95□□□□□ -2.26
CDH13P55290 Y_RNA.556-201ENST00000384677 113 ntBASIC0.95□□□□□ -2.26
CDH13P55290 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
CDH13P55290 RNU6-504P-201ENST00000516568 104 ntBASIC0.95□□□□□ -2.26
CDH13P55290 MIR2115-201ENST00000516657 100 ntBASIC0.95□□□□□ -2.26
CDH13P55290 AC007751.1-201ENST00000529260 376 ntBASIC0.95□□□□□ -2.26
CDH13P55290 AC131055.1-201ENST00000584626 316 ntBASIC0.95□□□□□ -2.26
CDH13P55290 AC243994.1-201ENST00000618627 109 ntBASIC0.95□□□□□ -2.26
CDH13P55290 MTND1P7-201ENST00000632801 297 ntBASIC0.95□□□□□ -2.26
CDH13P55290 RNU6-396P-201ENST00000365369 105 ntBASIC0.94□□□□□ -2.26
CDH13P55290 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
CDH13P55290 MIR570-201ENST00000384917 97 ntBASIC0.94□□□□□ -2.26
CDH13P55290 MIR616-201ENST00000385293 97 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 279.2 ms