Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR4282-201ENST00000583613 67 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 AC087685.1-201ENST00000587507 141 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.771-201ENST00000598668 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.789-201ENST00000622480 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 RNU6-268P-201ENST00000364174 107 ntBASIC1□□□□□ -2.25
HMGCS2P54868 Y_RNA.293-201ENST00000364908 93 ntBASIC1□□□□□ -2.25
HMGCS2P54868 Y_RNA.393-201ENST00000383936 102 ntBASIC1□□□□□ -2.25
HMGCS2P54868 MIR526A2-201ENST00000390198 65 ntBASIC1□□□□□ -2.25
HMGCS2P54868 RNU6-1054P-201ENST00000411293 104 ntBASIC1□□□□□ -2.25
HMGCS2P54868 SNORD127-201ENST00000458892 86 ntBASIC1□□□□□ -2.25
HMGCS2P54868 SNORA74.3-201ENST00000517108 154 ntBASIC1□□□□□ -2.25
HMGCS2P54868 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1□□□□□ -2.25
HMGCS2P54868 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
HMGCS2P54868 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
HMGCS2P54868 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
HMGCS2P54868 SNORD14E-201ENST00000364009 85 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 Y_RNA.363-201ENST00000365529 113 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 MIR626-201ENST00000385032 94 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 MIR136-201ENST00000385207 82 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 RNU2-38P-201ENST00000410856 79 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 AL118496.2-201ENST00000448300 230 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 AC048334.1-201ENST00000477975 159 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGCS2P54868 MIR4724-201ENST00000579485 89 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
HMGCS2P54868 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGCS2P54868 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
HMGCS2P54868 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HMGCS2P54868 Y_RNA.24-201ENST00000362508 103 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNU6-442P-201ENST00000383968 104 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 Y_RNA.562-201ENST00000384695 113 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNA5SP496-201ENST00000391240 109 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGCS2P54868 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGCS2P54868 MTND1P19-201ENST00000511780 315 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 Y_RNA.668-201ENST00000516233 93 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNU6-830P-201ENST00000516353 107 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 RNA5SP404-201ENST00000517118 132 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 AC100767.1-201ENST00000528178 123 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 AC011921.3-201ENST00000605540 361 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 AC006441.5-201ENST00000612680 209 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 uc_338.4-201ENST00000616635 176 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 U6.104-201ENST00000637979 90 ntBASIC0.98□□□□□ -2.25
HMGCS2P54868 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGCS2P54868 MIR367-201ENST00000362299 68 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 Y_RNA.76-201ENST00000362931 109 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 AC245047.7-201ENST00000440265 293 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 SNORD123-201ENST00000459473 70 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 SNORA31.2-201ENST00000516019 134 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 RNU7-149P-201ENST00000516739 59 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 SNORA18.7-201ENST00000516910 131 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 MIR5688-201ENST00000580619 83 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 AL049861.1-201ENST00000603130 150 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 AL357312.1-201ENST00000603879 298 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 Y_RNA.802-201ENST00000614892 130 ntBASIC0.97□□□□□ -2.25
HMGCS2P54868 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.97□□□□□ -2.25
HMGCS2P54868 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.25
HMGCS2P54868 Y_RNA.14-201ENST00000362415 103 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 Y_RNA.229-201ENST00000364347 113 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 Y_RNA.277-201ENST00000364754 102 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 RNU6-1138P-201ENST00000365359 106 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 Y_RNA.352-201ENST00000365439 102 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HMGCS2P54868 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGCS2P54868 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 MTND3P2-201ENST00000438452 342 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 RNU7-41P-201ENST00000515917 61 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 RN7SKP164-201ENST00000516138 266 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 SNORD77.4-201ENST00000516158 81 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 SNORD111.1-201ENST00000516421 86 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 PRELID3BP2-201ENST00000605362 201 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
HMGCS2P54868 Y_RNA.205-201ENST00000364128 113 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 snoU2_19.4-201ENST00000364329 80 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 Y_RNA.288-201ENST00000364854 92 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 Y_RNA.304-201ENST00000365011 112 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 SNORA8.3-201ENST00000384679 139 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 Y_RNA.590-201ENST00000410140 107 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 RPS26P48-201ENST00000491713 339 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 SCARNA8-201ENST00000515924 131 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AP003716.2-201ENST00000528260 108 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 MIR4764-201ENST00000580680 88 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 MIR4503-201ENST00000582187 83 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 MIR548AR-201ENST00000582191 57 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AC006006.1-201ENST00000603082 144 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AL391903.3-201ENST00000612158 163 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms