Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
LIG4P49917 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.93□□□□□ -2.26
LIG4P49917 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
LIG4P49917 MIR4791-201ENST00000607666 84 ntBASIC0.93□□□□□ -2.26
LIG4P49917 MIR6516-201ENST00000630554 81 ntBASIC0.93□□□□□ -2.26
LIG4P49917 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LIG4P49917 Y_RNA.226-201ENST00000364337 114 ntBASIC0.92□□□□□ -2.26
LIG4P49917 RNU6-654P-201ENST00000364373 107 ntBASIC0.92□□□□□ -2.26
LIG4P49917 RNU4-10P-201ENST00000364383 140 ntBASIC0.92□□□□□ -2.26
LIG4P49917 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
LIG4P49917 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.92□□□□□ -2.26
LIG4P49917 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.92□□□□□ -2.26
LIG4P49917 SCARNA8-201ENST00000515924 131 ntBASIC0.92□□□□□ -2.26
LIG4P49917 SNORD77.4-201ENST00000516158 81 ntBASIC0.92□□□□□ -2.26
LIG4P49917 DEFB108E-201ENST00000524692 240 ntBASIC0.92□□□□□ -2.26
LIG4P49917 AC036111.3-201ENST00000526389 112 ntBASIC0.92□□□□□ -2.26
LIG4P49917 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
LIG4P49917 AC006006.1-201ENST00000603082 144 ntBASIC0.92□□□□□ -2.26
LIG4P49917 Y_RNA.802-201ENST00000614892 130 ntBASIC0.92□□□□□ -2.26
LIG4P49917 AC106800.4-201ENST00000614905 153 ntBASIC0.92□□□□□ -2.26
LIG4P49917 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.92□□□□□ -2.26
LIG4P49917 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIG4P49917 RNU6-211P-201ENST00000384047 107 ntBASIC0.91□□□□□ -2.26
LIG4P49917 RNU6-1109P-201ENST00000391187 107 ntBASIC0.91□□□□□ -2.26
LIG4P49917 RNU6-847P-201ENST00000411115 108 ntBASIC0.91□□□□□ -2.26
LIG4P49917 MTCO2P24-201ENST00000515611 426 ntBASIC0.91□□□□□ -2.26
LIG4P49917 Y_RNA.666-201ENST00000516187 112 ntBASIC0.91□□□□□ -2.26
LIG4P49917 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
LIG4P49917 RNU6-94P-201ENST00000607728 107 ntBASIC0.91□□□□□ -2.26
LIG4P49917 MTND1P7-201ENST00000632801 297 ntBASIC0.91□□□□□ -2.26
LIG4P49917 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIG4P49917 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
LIG4P49917 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
LIG4P49917 Y_RNA.275-201ENST00000364726 110 ntBASIC0.9□□□□□ -2.27
LIG4P49917 RNU6-1289P-201ENST00000384431 106 ntBASIC0.9□□□□□ -2.27
LIG4P49917 RNU2-13P-201ENST00000515909 113 ntBASIC0.9□□□□□ -2.27
LIG4P49917 MIR2115-201ENST00000516657 100 ntBASIC0.9□□□□□ -2.27
LIG4P49917 MIR4662B-201ENST00000579498 81 ntBASIC0.9□□□□□ -2.27
LIG4P49917 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
LIG4P49917 AC012433.1-201ENST00000588916 398 ntBASIC0.9□□□□□ -2.27
LIG4P49917 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.9□□□□□ -2.27
LIG4P49917 RNU6-396P-201ENST00000365369 105 ntBASIC0.89□□□□□ -2.27
LIG4P49917 Y_RNA.486-201ENST00000384398 107 ntBASIC0.89□□□□□ -2.27
LIG4P49917 RNU6-713P-201ENST00000384761 107 ntBASIC0.89□□□□□ -2.27
LIG4P49917 Y_RNA.587-201ENST00000391210 103 ntBASIC0.89□□□□□ -2.27
LIG4P49917 SNORD111-201ENST00000408139 94 ntBASIC0.89□□□□□ -2.27
LIG4P49917 RNU6-613P-201ENST00000410412 108 ntBASIC0.89□□□□□ -2.27
LIG4P49917 TRBVB-201ENST00000477100 408 ntBASIC0.89□□□□□ -2.27
LIG4P49917 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.89□□□□□ -2.27
LIG4P49917 MIR5688-201ENST00000580619 83 ntBASIC0.89□□□□□ -2.27
LIG4P49917 AP001282.2-201ENST00000616149 309 ntBASIC0.89□□□□□ -2.27
LIG4P49917 AC243994.1-201ENST00000618627 109 ntBASIC0.89□□□□□ -2.27
LIG4P49917 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
LIG4P49917 Y_RNA.24-201ENST00000362508 103 ntBASIC0.88□□□□□ -2.27
LIG4P49917 Y_RNA.117-201ENST00000363294 101 ntBASIC0.88□□□□□ -2.27
LIG4P49917 SNORD113.3-201ENST00000364630 78 ntBASIC0.88□□□□□ -2.27
LIG4P49917 Y_RNA.269-201ENST00000364685 89 ntBASIC0.88□□□□□ -2.27
LIG4P49917 Y_RNA.422-201ENST00000384054 114 ntBASIC0.88□□□□□ -2.27
LIG4P49917 SNORA8.3-201ENST00000384679 139 ntBASIC0.88□□□□□ -2.27
LIG4P49917 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
LIG4P49917 RNA5SP95-201ENST00000410319 137 ntBASIC0.88□□□□□ -2.27
LIG4P49917 AC107297.1-201ENST00000459991 176 ntBASIC0.88□□□□□ -2.27
LIG4P49917 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
LIG4P49917 AP003072.1-201ENST00000531740 145 ntBASIC0.88□□□□□ -2.27
LIG4P49917 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
LIG4P49917 Y_RNA.44-201ENST00000362676 108 ntBASIC0.87□□□□□ -2.27
LIG4P49917 Y_RNA.237-201ENST00000364439 102 ntBASIC0.87□□□□□ -2.27
LIG4P49917 Y_RNA.376-201ENST00000365638 108 ntBASIC0.87□□□□□ -2.27
LIG4P49917 Y_RNA.512-201ENST00000384518 102 ntBASIC0.87□□□□□ -2.27
LIG4P49917 SNORA2B-201ENST00000384583 137 ntBASIC0.87□□□□□ -2.27
LIG4P49917 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
LIG4P49917 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
LIG4P49917 AL035398.1-201ENST00000430869 322 ntBASIC0.87□□□□□ -2.27
LIG4P49917 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.87□□□□□ -2.27
LIG4P49917 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
LIG4P49917 AC007751.1-201ENST00000529260 376 ntBASIC0.87□□□□□ -2.27
LIG4P49917 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
LIG4P49917 AC108706.1-201ENST00000611053 297 ntBASIC0.87□□□□□ -2.27
LIG4P49917 SNORD115-28-201ENST00000363931 81 ntBASIC0.86□□□□□ -2.27
LIG4P49917 Y_RNA.229-201ENST00000364347 113 ntBASIC0.86□□□□□ -2.27
LIG4P49917 Y_RNA.241-201ENST00000364470 117 ntBASIC0.86□□□□□ -2.27
LIG4P49917 Y_RNA.572-201ENST00000384757 98 ntBASIC0.86□□□□□ -2.27
LIG4P49917 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
LIG4P49917 RNU2-64P-201ENST00000411315 191 ntBASIC0.86□□□□□ -2.27
LIG4P49917 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.86□□□□□ -2.27
LIG4P49917 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
LIG4P49917 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
LIG4P49917 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
LIG4P49917 RNU6-635P-201ENST00000516651 102 ntBASIC0.86□□□□□ -2.27
LIG4P49917 SNORD115-34-201ENST00000362441 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-12-201ENST00000362583 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-29-201ENST00000362834 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-9-201ENST00000362912 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-21-201ENST00000362963 81 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-14-201ENST00000363090 81 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-13-201ENST00000363358 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-41-201ENST00000363608 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-11-201ENST00000363616 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-5-201ENST00000363633 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-39-201ENST00000363694 82 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 289.8 ms