Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTND1P7-201ENST00000632801 297 ntBASIC0.44□□□□□ -2.34
CXCL12P48061 AC068700.1-201ENST00000565862 3754 ntBASIC0.44□□□□□ -2.34
CXCL12P48061 Y_RNA.222-201ENST00000364264 102 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 RNU6-308P-201ENST00000390957 107 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 MIR1827-201ENST00000408549 66 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 Y_RNA.602-201ENST00000410535 92 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 AC098869.1-201ENST00000481627 292 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 RNU6-475P-201ENST00000516073 104 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 RNA5SP395-201ENST00000516567 118 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 MIR2115-201ENST00000516657 100 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.43□□□□□ -2.34
CXCL12P48061 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CXCL12P48061 MIR4801-201ENST00000582704 82 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 AL136317.1-201ENST00000612653 226 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 Y_RNA.804-201ENST00000615262 101 ntBASIC0.43□□□□□ -2.34
CXCL12P48061 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CXCL12P48061 MIR369-201ENST00000362155 70 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 Y_RNA.168-201ENST00000363740 102 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 RNU6-396P-201ENST00000365369 105 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CXCL12P48061 RNU6-763P-201ENST00000390865 106 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 AC244098.3-201ENST00000424803 96 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 HSPE1P25-201ENST00000455484 251 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
CXCL12P48061 RNU6-764P-201ENST00000516396 105 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.42□□□□□ -2.34
CXCL12P48061 AL133255.1-201ENST00000606374 441 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 MIR376A1-201ENST00000616574 68 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
CXCL12P48061 MIR1-1-201ENST00000362147 71 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 Y_RNA.31-201ENST00000362574 102 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU6-899P-201ENST00000363947 107 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 Y_RNA.280-201ENST00000364765 112 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 Y_RNA.419-201ENST00000384041 102 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 Y_RNA.424-201ENST00000384063 103 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU6-205P-201ENST00000390858 107 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 Y_RNA.645-201ENST00000391229 102 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU6-383P-201ENST00000410864 94 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 MTND4P19-201ENST00000446659 478 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 snoU13.21-201ENST00000459368 105 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 MRPS35P2-201ENST00000508242 191 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU2-13P-201ENST00000515909 113 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU7-25P-201ENST00000516544 62 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 RNU6-1007P-201ENST00000516586 107 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 AC124312.5-201ENST00000604451 268 ntBASIC0.41□□□□□ -2.34
CXCL12P48061 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CXCL12P48061 RNU6-369P-201ENST00000362515 102 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNU6-450P-201ENST00000364654 107 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 SNORA1.2-201ENST00000365189 134 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CXCL12P48061 Y_RNA.395-201ENST00000383945 109 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 Y_RNA.494-201ENST00000384432 111 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 Y_RNA.547-201ENST00000384654 119 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNA5SP63-201ENST00000391225 112 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNU6-847P-201ENST00000411115 108 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 Y_RNA.637-201ENST00000459424 114 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RNU4-54P-201ENST00000516428 129 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 AC104695.3-201ENST00000604052 296 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 RAC1P9-201ENST00000604990 392 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.4□□□□□ -2.35
CXCL12P48061 AC022140.2-201ENST00000623500 188 ntBASIC0.4□□□□□ -2.35
CXCL12P48061 Y_RNA.105-201ENST00000363182 111 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 Y_RNA.136-201ENST00000363444 102 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 RNU6-1205P-201ENST00000363625 106 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 Y_RNA.183-201ENST00000363882 113 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 Y_RNA.445-201ENST00000384168 102 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 RNU6-125P-201ENST00000384505 107 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 Y_RNA.569-201ENST00000384749 103 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 SNORD115-46-201ENST00000390982 71 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.39□□□□□ -2.35
CXCL12P48061 AC090844.1-201ENST00000422019 156 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 AC015818.7-201ENST00000428754 109 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 MTCO1P5-201ENST00000433573 344 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 AC087499.7-201ENST00000441958 109 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 SCARNA8-201ENST00000515924 131 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 RNU6-1170P-201ENST00000515974 106 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 RNU7-149P-201ENST00000516739 59 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 RNU6-897P-201ENST00000517135 105 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 AL049861.1-201ENST00000603130 150 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
CXCL12P48061 Y_RNA.242-201ENST00000364473 110 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 RNU6-580P-201ENST00000365159 107 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 Y_RNA.376-201ENST00000365638 108 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 RNU6-144P-201ENST00000383951 107 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 RNU6-823P-201ENST00000391042 103 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 MIR548O-201ENST00000408583 114 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms