Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.352-201ENST00000365439 102 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 MIR626-201ENST00000385032 94 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 SNORD72-201ENST00000390994 80 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 MIR1302-3-201ENST00000408128 138 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 SNORD123-201ENST00000459473 70 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 SNORA31.2-201ENST00000516019 134 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 SNORD111.1-201ENST00000516421 86 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 Y_RNA.133-201ENST00000363428 110 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 Y_RNA.288-201ENST00000364854 92 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 RNU6-472P-201ENST00000384299 107 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 AL603910.2-201ENST00000407268 136 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 Y_RNA.590-201ENST00000410140 107 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.03□□□□□ -2.24
NEDD4P46934 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.03□□□□□ -2.24
NEDD4P46934 SNORA18.7-201ENST00000516910 131 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 MIR4282-201ENST00000583613 67 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 AL096861.1-201ENST00000610899 123 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.03□□□□□ -2.24
NEDD4P46934 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
NEDD4P46934 Y_RNA.117-201ENST00000363294 101 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 RNY1-201ENST00000364228 113 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 RNU6-1067P-201ENST00000384752 107 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 SNORD12-201ENST00000391002 90 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.02□□□□□ -2.25
NEDD4P46934 MTCYBP9-201ENST00000431021 303 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 Y_RNA.679-201ENST00000516416 91 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 RNU7-149P-201ENST00000516739 59 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 MIR4764-201ENST00000580680 88 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 AL049861.1-201ENST00000603130 150 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 PRELID3BP2-201ENST00000605362 201 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
NEDD4P46934 Y_RNA.24-201ENST00000362508 103 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SNORA1.2-201ENST00000365189 134 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
NEDD4P46934 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.01□□□□□ -2.25
NEDD4P46934 AC245047.8-201ENST00000456455 284 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SNORD127-201ENST00000458892 86 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SNORD77.4-201ENST00000516158 81 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 AL391903.3-201ENST00000612158 163 ntBASIC1.01□□□□□ -2.25
NEDD4P46934 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.01□□□□□ -2.25
NEDD4P46934 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
NEDD4P46934 Y_RNA.304-201ENST00000365011 112 ntBASIC1□□□□□ -2.25
NEDD4P46934 Y_RNA.396-201ENST00000383949 103 ntBASIC1□□□□□ -2.25
NEDD4P46934 RNY3P5-201ENST00000384127 102 ntBASIC1□□□□□ -2.25
NEDD4P46934 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
NEDD4P46934 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
NEDD4P46934 U8.17-201ENST00000391292 132 ntBASIC1□□□□□ -2.25
NEDD4P46934 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
NEDD4P46934 MIR548H3-201ENST00000408771 118 ntBASIC1□□□□□ -2.25
NEDD4P46934 MIR548J-201ENST00000408833 112 ntBASIC1□□□□□ -2.25
NEDD4P46934 RNU2-55P-201ENST00000411146 174 ntBASIC1□□□□□ -2.25
NEDD4P46934 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
NEDD4P46934 SNORD116-28-201ENST00000516123 91 ntBASIC1□□□□□ -2.25
NEDD4P46934 RN7SKP164-201ENST00000516138 266 ntBASIC1□□□□□ -2.25
NEDD4P46934 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1□□□□□ -2.25
NEDD4P46934 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
NEDD4P46934 AC012433.1-201ENST00000588916 398 ntBASIC1□□□□□ -2.25
NEDD4P46934 BX284668.6-201ENST00000606899 438 ntBASIC1□□□□□ -2.25
NEDD4P46934 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
NEDD4P46934 RNA5SP48-201ENST00000363969 126 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 SNORA70.7-201ENST00000384159 133 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 Y_RNA.587-201ENST00000391210 103 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 AC100767.1-201ENST00000528178 123 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 MIR548AR-201ENST00000582191 57 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
NEDD4P46934 RNA5SP264-201ENST00000363115 107 ntBASIC0.98□□□□□ -2.25
NEDD4P46934 Y_RNA.229-201ENST00000364347 113 ntBASIC0.98□□□□□ -2.25
NEDD4P46934 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
NEDD4P46934 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 RNU4-10P-201ENST00000364383 140 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 Y_RNA.562-201ENST00000384695 113 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 MIR613-201ENST00000385248 95 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 SNORA26-201ENST00000391286 122 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 RNU6-1132P-201ENST00000459214 107 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.97□□□□□ -2.25
NEDD4P46934 AP003716.2-201ENST00000528260 108 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.97□□□□□ -2.25
NEDD4P46934 AL353621.2-201ENST00000605340 133 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 AC015726.2-201ENST00000620112 122 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 AL365265.1-201ENST00000621045 234 ntBASIC0.97□□□□□ -2.25
NEDD4P46934 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 SNORD24-201ENST00000383884 75 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.416-201ENST00000384014 113 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms