Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MTND1P2-201ENST00000430604 821 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 HMGN1P33-201ENST00000432945 451 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 MTCO1P5-201ENST00000433573 344 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 MTND1P1-201ENST00000445453 368 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 AC098826.2-201ENST00000452011 651 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 RPL7P42-201ENST00000481005 679 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 AC109635.3-201ENST00000529536 185 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 MIR3152-201ENST00000579801 74 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 RNU6-99P-201ENST00000364721 107 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 SNORD28-201ENST00000384706 75 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 MIR7-2-201ENST00000384970 110 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 SNORD12C-201ENST00000386307 89 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 SNORD78.2-201ENST00000391076 69 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 MIR548K-201ENST00000408406 116 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.37□□□□□ -2.47
RPL28P46779 RNU7-53P-201ENST00000516705 60 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 SNORA31.14-201ENST00000516728 116 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 RN7SKP295-201ENST00000517264 153 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 AC131281.1-201ENST00000522984 164 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.37□□□□□ -2.47
RPL28P46779 AC138869.1-201ENST00000568623 124 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 AL080274.1-201ENST00000605565 220 ntBASIC-0.37□□□□□ -2.47
RPL28P46779 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORA1.1-201ENST00000364671 133 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 RNU6-923P-201ENST00000364753 107 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD116-9-201ENST00000384000 95 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD116-3-201ENST00000384287 95 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD116-7-201ENST00000384404 95 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD116-5-201ENST00000384462 95 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD115-47-201ENST00000391226 86 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 SNORD93-201ENST00000408813 74 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 RNA5SP118-201ENST00000410385 109 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 AC087499.4-201ENST00000448505 178 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 IGLVI-20-201ENST00000519296 130 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 MIR4639-201ENST00000584938 69 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.38□□□□□ -2.47
RPL28P46779 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 SNORA40.5-201ENST00000391061 128 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 RPS3AP52-201ENST00000435639 297 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 MTND3P10-201ENST00000450967 341 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 RNU6-307P-201ENST00000516743 106 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.39□□□□□ -2.47
RPL28P46779 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.39□□□□□ -2.47
RPL28P46779 SNORD114-31-201ENST00000363219 75 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 RNU6-652P-201ENST00000365488 107 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 MIR625-201ENST00000385047 85 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 RNA5SP163-201ENST00000410304 99 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 SNORA36B-201ENST00000410438 131 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.4□□□□□ -2.47
RPL28P46779 AL138752.1-201ENST00000452964 351 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 RNA5SP285-201ENST00000516619 119 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 RNU6-180P-201ENST00000516697 61 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 RNU6-765P-201ENST00000516916 99 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AC007751.1-201ENST00000529260 376 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 MIR4659A-201ENST00000580269 81 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.4□□□□□ -2.47
RPL28P46779 DEFB117-201ENST00000602356 141 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AC124312.5-201ENST00000604451 268 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 MIR6082-201ENST00000613604 109 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AC011476.5-201ENST00000615594 130 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 AC022140.2-201ENST00000623500 188 ntBASIC-0.4□□□□□ -2.47
RPL28P46779 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 SNORD114-12-201ENST00000365400 75 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 RNU2-16P-201ENST00000410712 136 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 RNU6-938P-201ENST00000411285 103 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AC024067.1-201ENST00000426199 223 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.41□□□□□ -2.48
RPL28P46779 RPS29P25-201ENST00000481709 171 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 RPS29P24-201ENST00000486345 171 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 MIR4423-201ENST00000580922 80 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AC092447.9-201ENST00000603395 144 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AL670379.3-201ENST00000605040 251 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AC015540.1-201ENST00000615828 501 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 AC244669.1-204ENST00000621564 178 ntBASIC-0.41□□□□□ -2.48
RPL28P46779 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.41□□□□□ -2.48
RPL28P46779 SNORD81.1-201ENST00000363064 77 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 SNORD115-28-201ENST00000363931 81 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 SNORA27-201ENST00000384323 126 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 MIR215-201ENST00000384858 110 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 MIR548F5-201ENST00000408421 86 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 RNU7-141P-201ENST00000459304 62 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.42□□□□□ -2.48
RPL28P46779 AC006600.1-201ENST00000572529 153 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 MIR548AD-201ENST00000584780 82 ntBASIC-0.42□□□□□ -2.48
RPL28P46779 RNY4P14-201ENST00000363656 96 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms