Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR6740-201ENST00000618268 113 ntBASIC0.15□□□□□ -2.39
BRCA1P38398 MIR6755-201ENST00000619993 66 ntBASIC0.15□□□□□ -2.39
BRCA1P38398 Y_RNA.222-201ENST00000364264 102 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 SNORD81.2-201ENST00000365153 76 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.14□□□□□ -2.39
BRCA1P38398 RNU2-11P-201ENST00000459191 187 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.14□□□□□ -2.39
BRCA1P38398 RNU6-758P-201ENST00000516292 89 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AC127455.1-201ENST00000565496 145 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 RNU6-490P-201ENST00000362985 107 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 Y_RNA.279-201ENST00000364763 95 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 RNU6-926P-201ENST00000384075 107 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 RNU6-679P-201ENST00000391003 106 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 Y_RNA.587-201ENST00000391210 103 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AL603910.2-201ENST00000407268 136 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 MIR1278-201ENST00000408753 81 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 RNU2-14P-201ENST00000411053 191 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AC096644.2-201ENST00000429278 159 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 RNU7-67P-201ENST00000459003 62 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 AC013791.1-201ENST00000616619 62 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 MIR548AY-201ENST00000617669 107 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 uc_338.16-201ENST00000621804 95 ntBASIC0.14□□□□□ -2.39
BRCA1P38398 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
BRCA1P38398 SNORD81.1-201ENST00000363064 77 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 RNU6-144P-201ENST00000383951 107 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 RNU4-30P-201ENST00000410245 143 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 POLR2KP2-201ENST00000438155 177 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 CHEK2P4-201ENST00000450340 246 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 FGF7P6-202ENST00000451282 293 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 NDUFA4P2-201ENST00000489989 244 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.13□□□□□ -2.39
BRCA1P38398 AC006157.1-201ENST00000611750 366 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.13□□□□□ -2.39
BRCA1P38398 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 Y_RNA.143-201ENST00000363520 106 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 RNU6-1209P-201ENST00000363655 107 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 Y_RNA.187-201ENST00000363918 113 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.12□□□□□ -2.39
BRCA1P38398 SNORA18.4-201ENST00000516440 124 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 SNORA40.14-201ENST00000516543 86 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 RN7SKP295-201ENST00000517264 153 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.12□□□□□ -2.39
BRCA1P38398 AP000942.4-201ENST00000604811 241 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AC138305.3-201ENST00000624988 240 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 SNORD72-201ENST00000390994 80 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 Y_RNA.592-201ENST00000410274 109 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 RNU7-152P-201ENST00000458982 64 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 RNU7-185P-201ENST00000459215 60 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AC007751.1-201ENST00000529260 376 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AL138825.1-201ENST00000618587 192 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 AL606534.2-204ENST00000635008 178 ntBASIC0.12□□□□□ -2.39
BRCA1P38398 SNORD115-28-201ENST00000363931 81 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 Y_RNA.387-201ENST00000383918 102 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 Y_RNA.474-201ENST00000384341 102 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 SNORA75.6-201ENST00000391318 127 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 PDCL2P1-201ENST00000419302 352 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.11□□□□□ -2.39
BRCA1P38398 SNRPGP12-201ENST00000449481 213 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 RNU6-764P-201ENST00000516396 105 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 SNORD92-201ENST00000585078 85 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AC005357.1-201ENST00000588399 301 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 Y_RNA.772-201ENST00000606692 102 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AC084782.3-201ENST00000612282 578 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AC093783.1-201ENST00000612976 329 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AC010205.1-201ENST00000616668 449 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 AC015726.2-201ENST00000620112 122 ntBASIC0.11□□□□□ -2.39
BRCA1P38398 RNU6-890P-201ENST00000384121 107 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 SNORA72.4-201ENST00000384174 132 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 SNORD83.1-201ENST00000411362 77 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 AL132765.2-201ENST00000610812 351 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 RNU7-62P-201ENST00000458856 62 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 AC107297.1-201ENST00000459991 176 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 RNU7-110P-201ENST00000516891 62 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 Y_RNA.713-201ENST00000517013 96 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 SNORA25.18-201ENST00000607153 114 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 SNORD113-5-201ENST00000607261 78 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 AC007485.1-201ENST00000616755 206 ntBASIC0.1□□□□□ -2.39
BRCA1P38398 SNORD118-201ENST00000363593 134 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 SNORA27-201ENST00000384323 126 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 RNU6-310P-201ENST00000384655 107 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 MIR548A2-201ENST00000384956 97 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 Y_RNA.599-201ENST00000410489 109 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 RNU6-277P-201ENST00000516272 106 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 MIR3612-201ENST00000579753 87 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 AC087685.1-201ENST00000587507 141 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 AL121655.1-201ENST00000605811 308 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 uc_338.6-201ENST00000613544 171 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 AC134878.1-201ENST00000619901 243 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 AC090971.5-201ENST00000621102 293 ntBASIC0.09□□□□□ -2.4
BRCA1P38398 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 SNORD45.3-201ENST00000363836 72 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms