Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-308P-201ENST00000390957 107 ntBASIC0.37□□□□□ -2.35
RORAP35398 RNU6-847P-201ENST00000411115 108 ntBASIC0.37□□□□□ -2.35
RORAP35398 BTF3P11-201ENST00000426582 477 ntBASIC0.37□□□□□ -2.35
RORAP35398 AC091959.1-201ENST00000495857 238 ntBASIC0.37□□□□□ -2.35
RORAP35398 SCARNA8-201ENST00000515924 131 ntBASIC0.37□□□□□ -2.35
RORAP35398 RNU6-976P-201ENST00000516086 111 ntBASIC0.37□□□□□ -2.35
RORAP35398 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
RORAP35398 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.37□□□□□ -2.35
RORAP35398 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RORAP35398 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
RORAP35398 Y_RNA.242-201ENST00000364473 110 ntBASIC0.36□□□□□ -2.35
RORAP35398 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
RORAP35398 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
RORAP35398 RNU6-763P-201ENST00000390865 106 ntBASIC0.36□□□□□ -2.35
RORAP35398 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.36□□□□□ -2.35
RORAP35398 SEPT14P8-201ENST00000508026 178 ntBASIC0.36□□□□□ -2.35
RORAP35398 RNU6-1007P-201ENST00000516586 107 ntBASIC0.36□□□□□ -2.35
RORAP35398 AC007751.1-201ENST00000529260 376 ntBASIC0.36□□□□□ -2.35
RORAP35398 AP000753.3-201ENST00000604083 169 ntBASIC0.36□□□□□ -2.35
RORAP35398 AC020891.4-201ENST00000605745 93 ntBASIC0.36□□□□□ -2.35
RORAP35398 SNORD113-5-201ENST00000607261 78 ntBASIC0.36□□□□□ -2.35
RORAP35398 AC007485.1-201ENST00000616755 206 ntBASIC0.36□□□□□ -2.35
RORAP35398 AC112487.2-201ENST00000637950 304 ntBASIC0.36□□□□□ -2.35
RORAP35398 Y_RNA.263-201ENST00000364659 114 ntBASIC0.35□□□□□ -2.35
RORAP35398 RNU6-934P-201ENST00000365154 107 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR548O-201ENST00000408583 114 ntBASIC0.35□□□□□ -2.35
RORAP35398 HSPE1P25-201ENST00000455484 251 ntBASIC0.35□□□□□ -2.35
RORAP35398 RNU6-507P-201ENST00000516045 100 ntBASIC0.35□□□□□ -2.35
RORAP35398 RNU6-764P-201ENST00000516396 105 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
RORAP35398 uc_338.4-201ENST00000616635 176 ntBASIC0.35□□□□□ -2.35
RORAP35398 MIR18A-201ENST00000362310 71 ntBASIC0.34□□□□□ -2.36
RORAP35398 Y_RNA.136-201ENST00000363444 102 ntBASIC0.34□□□□□ -2.36
RORAP35398 Y_RNA.579-201ENST00000390939 94 ntBASIC0.34□□□□□ -2.36
RORAP35398 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
RORAP35398 RNU6-383P-201ENST00000410864 94 ntBASIC0.34□□□□□ -2.36
RORAP35398 Y_RNA.637-201ENST00000459424 114 ntBASIC0.34□□□□□ -2.36
RORAP35398 RNU6-1170P-201ENST00000515974 106 ntBASIC0.34□□□□□ -2.36
RORAP35398 Y_RNA.713-201ENST00000517013 96 ntBASIC0.34□□□□□ -2.36
RORAP35398 Y_RNA.715-201ENST00000517082 110 ntBASIC0.34□□□□□ -2.36
RORAP35398 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.34□□□□□ -2.36
RORAP35398 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
RORAP35398 AC006157.1-201ENST00000611750 366 ntBASIC0.34□□□□□ -2.36
RORAP35398 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
RORAP35398 RNU6-899P-201ENST00000363947 107 ntBASIC0.33□□□□□ -2.36
RORAP35398 Y_RNA.197-201ENST00000364004 102 ntBASIC0.33□□□□□ -2.36
RORAP35398 Y_RNA.526-201ENST00000384572 110 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIR1302-11-201ENST00000408051 138 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIR1302-9-201ENST00000408365 138 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIR1302-10-201ENST00000408734 138 ntBASIC0.33□□□□□ -2.36
RORAP35398 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.33□□□□□ -2.36
RORAP35398 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
RORAP35398 MRPS35P2-201ENST00000508242 191 ntBASIC0.33□□□□□ -2.36
RORAP35398 RNU6-475P-201ENST00000516073 104 ntBASIC0.33□□□□□ -2.36
RORAP35398 Y_RNA.666-201ENST00000516187 112 ntBASIC0.33□□□□□ -2.36
RORAP35398 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
RORAP35398 RNU7-149P-201ENST00000516739 59 ntBASIC0.33□□□□□ -2.36
RORAP35398 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
RORAP35398 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIR1302-2-201ENST00000607096 138 ntBASIC0.33□□□□□ -2.36
RORAP35398 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
RORAP35398 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
RORAP35398 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
RORAP35398 Y_RNA.356-201ENST00000365475 113 ntBASIC0.32□□□□□ -2.36
RORAP35398 RNU6-913P-201ENST00000390913 95 ntBASIC0.32□□□□□ -2.36
RORAP35398 RNU6-938P-201ENST00000411285 103 ntBASIC0.32□□□□□ -2.36
RORAP35398 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.32□□□□□ -2.36
RORAP35398 MTCO1P5-201ENST00000433573 344 ntBASIC0.32□□□□□ -2.36
RORAP35398 RNU7-56P-201ENST00000458744 62 ntBASIC0.32□□□□□ -2.36
RORAP35398 snoU13.16-201ENST00000459350 104 ntBASIC0.32□□□□□ -2.36
RORAP35398 C8orf59P2-201ENST00000603441 271 ntBASIC0.32□□□□□ -2.36
RORAP35398 MIR6740-201ENST00000618268 113 ntBASIC0.32□□□□□ -2.36
RORAP35398 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-34-201ENST00000362441 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-12-201ENST00000362583 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-29-201ENST00000362834 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-9-201ENST00000362912 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-21-201ENST00000362963 81 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-14-201ENST00000363090 81 ntBASIC0.31□□□□□ -2.36
RORAP35398 Y_RNA.105-201ENST00000363182 111 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-13-201ENST00000363358 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-41-201ENST00000363608 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-11-201ENST00000363616 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-5-201ENST00000363633 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-39-201ENST00000363694 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-4-201ENST00000363810 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-16-201ENST00000363887 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-6-201ENST00000363942 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-42-201ENST00000364273 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 Y_RNA.258-201ENST00000364613 105 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-15-201ENST00000364809 81 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-1-201ENST00000364961 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-26-201ENST00000365067 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-10-201ENST00000365073 81 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-43-201ENST00000365503 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-36-201ENST00000365629 82 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms