Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
CD40P25942 RNU6-1211P-201ENST00000459179 105 ntBASIC1.96□□□□□ -2.1
CD40P25942 RNU5E-3P-201ENST00000515913 68 ntBASIC1.96□□□□□ -2.1
CD40P25942 IGLV3-17-201ENST00000519099 244 ntBASIC1.96□□□□□ -2.1
CD40P25942 AC090821.2-201ENST00000523552 176 ntBASIC1.96□□□□□ -2.1
CD40P25942 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
CD40P25942 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
CD40P25942 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
CD40P25942 MIR6766-201ENST00000622641 72 ntBASIC1.96□□□□□ -2.1
CD40P25942 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CD40P25942 Y_RNA.294-201ENST00000364916 102 ntBASIC1.95□□□□□ -2.1
CD40P25942 MIR221-201ENST00000385135 110 ntBASIC1.95□□□□□ -2.1
CD40P25942 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CD40P25942 RNA5SP236-201ENST00000516169 116 ntBASIC1.95□□□□□ -2.1
CD40P25942 MIR8063-201ENST00000621930 81 ntBASIC1.95□□□□□ -2.1
CD40P25942 AP000648.3-201ENST00000623539 4507 ntBASIC1.95□□□□□ -2.1
CD40P25942 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CD40P25942 RNU6-309P-201ENST00000364573 106 ntBASIC1.94□□□□□ -2.1
CD40P25942 SNORA1.2-201ENST00000365189 134 ntBASIC1.94□□□□□ -2.1
CD40P25942 Y_RNA.370-201ENST00000365589 108 ntBASIC1.94□□□□□ -2.1
CD40P25942 SNORA27-201ENST00000384323 126 ntBASIC1.94□□□□□ -2.1
CD40P25942 Y_RNA.494-201ENST00000384432 111 ntBASIC1.94□□□□□ -2.1
CD40P25942 SNORD28B-201ENST00000390993 75 ntBASIC1.94□□□□□ -2.1
CD40P25942 SNORA40.5-201ENST00000391061 128 ntBASIC1.94□□□□□ -2.1
CD40P25942 AL603914.1-201ENST00000401964 204 ntBASIC1.94□□□□□ -2.1
CD40P25942 RNA5SP181-201ENST00000410246 98 ntBASIC1.94□□□□□ -2.1
CD40P25942 AL606753.1-201ENST00000427435 87 ntBASIC1.94□□□□□ -2.1
CD40P25942 MTATP6P21-201ENST00000440681 189 ntBASIC1.94□□□□□ -2.1
CD40P25942 AC005908.1-201ENST00000468701 347 ntBASIC1.94□□□□□ -2.1
CD40P25942 RPS26P48-201ENST00000491713 339 ntBASIC1.94□□□□□ -2.1
CD40P25942 Y_RNA.692-201ENST00000516627 105 ntBASIC1.94□□□□□ -2.1
CD40P25942 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
CD40P25942 MIR548AR-201ENST00000582191 57 ntBASIC1.94□□□□□ -2.1
CD40P25942 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
CD40P25942 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
CD40P25942 MIR342-201ENST00000362212 99 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-34-201ENST00000362441 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-12-201ENST00000362583 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-29-201ENST00000362834 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-9-201ENST00000362912 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-21-201ENST00000362963 81 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-14-201ENST00000363090 81 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-13-201ENST00000363358 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-41-201ENST00000363608 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-11-201ENST00000363616 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-5-201ENST00000363633 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-39-201ENST00000363694 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-4-201ENST00000363810 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-16-201ENST00000363887 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-6-201ENST00000363942 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-42-201ENST00000364273 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-15-201ENST00000364809 81 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-1-201ENST00000364961 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-26-201ENST00000365067 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-10-201ENST00000365073 81 ntBASIC1.93□□□□□ -2.1
CD40P25942 Y_RNA.351-201ENST00000365436 96 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-43-201ENST00000365503 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-36-201ENST00000365629 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 RNU6-959P-201ENST00000384671 107 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNX2P2-201ENST00000424553 323 ntBASIC1.93□□□□□ -2.1
CD40P25942 RNU6-322P-201ENST00000516010 103 ntBASIC1.93□□□□□ -2.1
CD40P25942 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
CD40P25942 RNU7-70P-201ENST00000516941 66 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORA74.3-201ENST00000517108 154 ntBASIC1.93□□□□□ -2.1
CD40P25942 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CD40P25942 Y_RNA.757-201ENST00000578934 114 ntBASIC1.93□□□□□ -2.1
CD40P25942 SNORD115-40-201ENST00000606510 82 ntBASIC1.93□□□□□ -2.1
CD40P25942 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
CD40P25942 MIR539-201ENST00000365690 78 ntBASIC1.92□□□□□ -2.1
CD40P25942 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
CD40P25942 MIR653-201ENST00000385279 96 ntBASIC1.92□□□□□ -2.1
CD40P25942 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
CD40P25942 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
CD40P25942 AC107297.1-201ENST00000459991 176 ntBASIC1.92□□□□□ -2.1
CD40P25942 AC090049.2-201ENST00000550377 109 ntBASIC1.92□□□□□ -2.1
CD40P25942 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.92□□□□□ -2.1
CD40P25942 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
CD40P25942 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
CD40P25942 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
CD40P25942 MIR570-201ENST00000384917 97 ntBASIC1.91□□□□□ -2.1
CD40P25942 AL451046.2-201ENST00000403074 277 ntBASIC1.91□□□□□ -2.1
CD40P25942 HSPE1P24-201ENST00000450782 238 ntBASIC1.91□□□□□ -2.1
CD40P25942 RNA5SP200-201ENST00000516360 103 ntBASIC1.91□□□□□ -2.1
CD40P25942 RNU6-922P-201ENST00000516753 99 ntBASIC1.91□□□□□ -2.1
CD40P25942 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
CD40P25942 RNA5SP402-201ENST00000517148 110 ntBASIC1.91□□□□□ -2.1
CD40P25942 AC009831.4-201ENST00000620744 325 ntBASIC1.91□□□□□ -2.1
CD40P25942 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
CD40P25942 ZNF720P1-201ENST00000562403 1939 ntBASIC1.9□□□□□ -2.11
CD40P25942 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.9□□□□□ -2.11
CD40P25942 Y_RNA.218-201ENST00000364218 104 ntBASIC1.9□□□□□ -2.11
CD40P25942 SNORD113-1-201ENST00000365321 69 ntBASIC1.9□□□□□ -2.11
CD40P25942 Y_RNA.651-201ENST00000459380 103 ntBASIC1.9□□□□□ -2.11
CD40P25942 RPS29P24-201ENST00000486345 171 ntBASIC1.9□□□□□ -2.11
CD40P25942 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.11
CD40P25942 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40P25942 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
CD40P25942 MIR3121-201ENST00000579680 77 ntBASIC1.9□□□□□ -2.11
CD40P25942 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
CD40P25942 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms