Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 Y_RNA.366-201ENST00000365540 102 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 MIR515-2-201ENST00000384883 83 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 MIR515-1-201ENST00000384884 83 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 MIR499A-201ENST00000384903 122 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.09□□□□□ -2.07
POLR2AP24928 AC073413.2-201ENST00000604332 360 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.07
POLR2AP24928 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
POLR2AP24928 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
POLR2AP24928 Y_RNA.114-201ENST00000363265 113 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 Y_RNA.267-201ENST00000364679 109 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 SNORD72-201ENST00000390994 80 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 MLLT10P1-201ENST00000418346 262 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 Y_RNA.666-201ENST00000516187 112 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 AC022217.4-201ENST00000604389 163 ntBASIC2.09□□□□□ -2.08
POLR2AP24928 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
POLR2AP24928 MTND5P18-201ENST00000445624 1801 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 SNORA1-201ENST00000384107 130 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 RNU6-106P-201ENST00000384405 107 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 Y_RNA.540-201ENST00000384638 111 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 CYP2C59P-201ENST00000457790 269 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 Y_RNA.690-201ENST00000516603 95 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR2AP24928 AL022345.2-201ENST00000606307 135 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 MIR6504-201ENST00000613520 61 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 MIR8054-201ENST00000620877 86 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 AC027279.3-201ENST00000625055 122 ntBASIC2.08□□□□□ -2.08
POLR2AP24928 RNU6-53P-201ENST00000365367 106 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 RNA5SP136-201ENST00000410906 107 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 AC245517.4-201ENST00000448601 281 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 RNU1-131P-201ENST00000458943 161 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 RNU6-781P-201ENST00000516377 101 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
POLR2AP24928 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
POLR2AP24928 RNU6-833P-201ENST00000363486 107 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 RNU6-1189P-201ENST00000383958 107 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 RNU6-905P-201ENST00000384434 107 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 Y_RNA.528-201ENST00000384575 108 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 MIR627-201ENST00000384979 97 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR2AP24928 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR2AP24928 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR2AP24928 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 AP001318.4-201ENST00000616637 121 ntBASIC2.06□□□□□ -2.08
POLR2AP24928 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
POLR2AP24928 SNORA7.1-201ENST00000363750 139 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 RNY1P11-201ENST00000363759 113 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 RNU6-978P-201ENST00000364371 103 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 SNORD61-201ENST00000384252 73 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 RNU6-1096P-201ENST00000517089 102 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 MIR3169-201ENST00000578032 83 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 Y_RNA.757-201ENST00000578934 114 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR2AP24928 SNORA4-201ENST00000584302 138 ntBASIC2.05□□□□□ -2.08
POLR2AP24928 AC005336.3-201ENST00000623833 2679 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 RNU1-109P-201ENST00000383960 147 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 SNORD116-21-201ENST00000384507 92 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 Y_RNA.521-201ENST00000384560 114 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 RPS26P45-201ENST00000471748 340 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 RNU6-830P-201ENST00000516353 107 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 RNU6-537P-201ENST00000517277 103 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 AL121890.5-201ENST00000620848 304 ntBASIC2.04□□□□□ -2.08
POLR2AP24928 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.04□□□□□ -2.08
POLR2AP24928 RNU6-1292P-201ENST00000383856 107 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 RNY1P6-201ENST00000384193 109 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 MIR522-201ENST00000385071 87 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 RNU6-440P-201ENST00000390882 105 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 SNRPGP10-201ENST00000432323 225 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 COX6CP6-201ENST00000490840 228 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 RNY4P20-201ENST00000516678 93 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 RNU7-128P-201ENST00000517247 62 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 AC004812.1-201ENST00000540773 146 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR2AP24928 MIR2052-201ENST00000636055 55 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 FO624990.1-201ENST00000636373 85 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
POLR2AP24928 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 MIR450A1-201ENST00000362262 91 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 Y_RNA.351-201ENST00000365436 96 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 RN7SKP101-201ENST00000411376 320 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR2AP24928 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 MIR4446-201ENST00000578505 67 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 MIR4452-201ENST00000583004 71 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 MIR5197-201ENST00000583721 112 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 AL645939.4-201ENST00000604495 135 ntBASIC2.03□□□□□ -2.08
POLR2AP24928 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms