Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 SNORA8.3-201ENST00000384679 139 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MIR570-201ENST00000384917 97 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MIR568-201ENST00000385036 95 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 SNORD28B-201ENST00000390993 75 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 snoU13.25-201ENST00000458945 104 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MTCO2P24-201ENST00000515611 426 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 MIR4764-201ENST00000580680 88 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 AL021707.8-201ENST00000609428 183 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
ACTN1P12814 Y_RNA.133-201ENST00000363428 110 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 Y_RNA.288-201ENST00000364854 92 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 RNA5SP496-201ENST00000391240 109 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 MTCYBP9-201ENST00000431021 303 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 RN7SKP164-201ENST00000516138 266 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 RNU7-181P-201ENST00000517234 74 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 Pinc.1-201ENST00000616452 154 ntBASIC1.21□□□□□ -2.22
ACTN1P12814 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ACTN1P12814 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ACTN1P12814 RNA5SP325-201ENST00000363756 130 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 Y_RNA.229-201ENST00000364347 113 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 MIR526A2-201ENST00000390198 65 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 MIR4643-201ENST00000577473 78 ntBASIC1.2□□□□□ -2.22
ACTN1P12814 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
ACTN1P12814 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.19□□□□□ -2.22
ACTN1P12814 Y_RNA.477-201ENST00000384352 108 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 MIR1302-3-201ENST00000408128 138 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 RNU6-1054P-201ENST00000411293 104 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
ACTN1P12814 Y_RNA.666-201ENST00000516187 112 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 RNU7-25P-201ENST00000516544 62 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 AC100767.1-201ENST00000528178 123 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 MIR548AR-201ENST00000582191 57 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.19□□□□□ -2.22
ACTN1P12814 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ACTN1P12814 Y_RNA.416-201ENST00000384014 113 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 MIR626-201ENST00000385032 94 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 MT-TT-201ENST00000387460 66 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 U8.17-201ENST00000391292 132 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 MIR548O-201ENST00000408583 114 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTN1P12814 SNORD2.1-201ENST00000458762 69 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 SNORD127-201ENST00000458892 86 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTN1P12814 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTN1P12814 AC006441.5-201ENST00000612680 209 ntBASIC1.18□□□□□ -2.22
ACTN1P12814 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTN1P12814 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTN1P12814 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ACTN1P12814 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.82-201ENST00000363000 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.92-201ENST00000363043 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 SNORD27-201ENST00000363981 72 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.235-201ENST00000364412 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.306-201ENST00000365015 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.312-201ENST00000365089 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.322-201ENST00000365151 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.352-201ENST00000365439 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.486-201ENST00000384398 107 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.650-201ENST00000459002 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.17□□□□□ -2.22
ACTN1P12814 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 SNORD77.4-201ENST00000516158 81 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 RNU7-43P-201ENST00000516554 64 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.777-201ENST00000516982 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 MIR5000-201ENST00000577717 103 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.771-201ENST00000598668 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 AL391903.3-201ENST00000612158 163 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 AL365265.1-201ENST00000621045 234 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 Y_RNA.789-201ENST00000622480 102 ntBASIC1.17□□□□□ -2.22
ACTN1P12814 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ACTN1P12814 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ACTN1P12814 RNU6-574P-201ENST00000384265 107 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ACTN1P12814 Y_RNA.622-201ENST00000411091 108 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.16□□□□□ -2.22
ACTN1P12814 RNU6-1132P-201ENST00000459214 107 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.16□□□□□ -2.22
ACTN1P12814 RNU6-453P-201ENST00000516819 85 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 AC027335.2-201ENST00000624030 375 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 AC008133.2-201ENST00000624540 351 ntBASIC1.16□□□□□ -2.22
ACTN1P12814 MIR103A2-201ENST00000362154 78 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms