Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 AC021506.2-201ENST00000612354 169 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 MIR7843-201ENST00000622274 79 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL6A2P12110 Y_RNA.440-201ENST00000384120 114 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 MTATP6P29-201ENST00000415057 132 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AC099513.1-201ENST00000490423 301 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 RNU6-772P-201ENST00000516042 105 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AP003484.1-201ENST00000530974 250 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.23□□□□□ -2.05
COL6A2P12110 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
COL6A2P12110 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AL590808.1-201ENST00000618696 141 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AC015726.2-201ENST00000620112 122 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
COL6A2P12110 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL6A2P12110 SNORA2.2-201ENST00000365473 135 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 AL627390.1-201ENST00000396055 340 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 RPS26P48-201ENST00000491713 339 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 AC008413.1-201ENST00000511864 177 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 SNORD36C-201ENST00000516733 66 ntBASIC2.22□□□□□ -2.05
COL6A2P12110 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
COL6A2P12110 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
COL6A2P12110 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL6A2P12110 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
COL6A2P12110 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL6A2P12110 RNU6-215P-201ENST00000365169 102 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 Y_RNA.525-201ENST00000384570 113 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 MIR452-201ENST00000385020 85 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 MIR660-201ENST00000385235 97 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 MIRLET7F2-201ENST00000385277 83 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.21□□□□□ -2.06
COL6A2P12110 PGBD4P5-201ENST00000445958 426 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 RN7SKP19-201ENST00000516016 252 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 MIR4524B-201ENST00000581569 115 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 U6.95-201ENST00000636931 70 ntBASIC2.21□□□□□ -2.06
COL6A2P12110 MIR424-201ENST00000362227 98 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 MIR504-201ENST00000385065 83 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 SNORA40.5-201ENST00000391061 128 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 RNU7-34P-201ENST00000459394 64 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 AC133485.4-201ENST00000561835 220 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 AC138907.4-201ENST00000570107 226 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 MIR4769-201ENST00000584126 77 ntBASIC2.2□□□□□ -2.06
COL6A2P12110 SNORD58C-201ENST00000365223 64 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 RNU6-1056P-201ENST00000383996 107 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 SNORD20-201ENST00000384550 80 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 SNORA67.4-201ENST00000384688 142 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 RNA5SP233-201ENST00000459153 113 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 RNU7-80P-201ENST00000459562 61 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 RNU5E-3P-201ENST00000515913 68 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 SNORA31.17-201ENST00000516953 127 ntBASIC2.19□□□□□ -2.06
COL6A2P12110 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
COL6A2P12110 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
COL6A2P12110 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 RNA5SP212-201ENST00000391223 107 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 RNU6-1061P-201ENST00000516530 99 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 AC108081.1-201ENST00000604358 221 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 AC064859.1-201ENST00000624741 174 ntBASIC2.18□□□□□ -2.06
COL6A2P12110 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-34-201ENST00000362441 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-12-201ENST00000362583 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-29-201ENST00000362834 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-9-201ENST00000362912 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-21-201ENST00000362963 81 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-14-201ENST00000363090 81 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-13-201ENST00000363358 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-41-201ENST00000363608 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-11-201ENST00000363616 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-5-201ENST00000363633 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-39-201ENST00000363694 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-4-201ENST00000363810 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-16-201ENST00000363887 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-6-201ENST00000363942 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-42-201ENST00000364273 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-15-201ENST00000364809 81 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-1-201ENST00000364961 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-26-201ENST00000365067 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-10-201ENST00000365073 81 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-43-201ENST00000365503 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-36-201ENST00000365629 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 Y_RNA.454-201ENST00000384224 113 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 MIR136-201ENST00000385207 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 U8.17-201ENST00000391292 132 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 RNU6-1064P-201ENST00000410626 104 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 Y_RNA.630-201ENST00000411370 108 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORA18.7-201ENST00000516910 131 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 IGKV1-22-201ENST00000524313 326 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 SNORD115-40-201ENST00000606510 82 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms