Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 Y_RNA.176-201ENST00000363815 109 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 RNU6-740P-201ENST00000364734 105 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 SNORA1.2-201ENST00000365189 134 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.483-201ENST00000384380 101 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 RNA5SP220-201ENST00000516298 104 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 MIR4662B-201ENST00000579498 81 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.24-201ENST00000362508 103 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 RNU6-42P-201ENST00000384165 107 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.459-201ENST00000384251 102 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 RNU6-738P-201ENST00000384531 106 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 MIR570-201ENST00000384917 97 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 MT-TW-201ENST00000387382 68 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.587-201ENST00000391210 103 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 MIR548O-201ENST00000408583 114 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
RAB40ALP0C0E4 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1□□□□□ -2.25
RAB40ALP0C0E4 MTCO2P24-201ENST00000515611 426 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 SNORD77.4-201ENST00000516158 81 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 RNU7-25P-201ENST00000516544 62 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 RNU6-113P-201ENST00000516653 101 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 AP003716.2-201ENST00000528260 108 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 AL117187.1-201ENST00000555482 181 ntBASIC1□□□□□ -2.25
RAB40ALP0C0E4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 RNU4-57P-201ENST00000515980 135 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 SEPT14P17-201ENST00000617978 177 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 SNORA51.10-201ENST00000384418 136 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 SCARNA8-201ENST00000515924 131 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.679-201ENST00000516416 91 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 AC100767.1-201ENST00000528178 123 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.47-201ENST00000362697 108 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.149-201ENST00000363558 117 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 RNU6-472P-201ENST00000384299 107 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 MIR626-201ENST00000385032 94 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 RNU6-651P-201ENST00000411040 105 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 SNORD2.1-201ENST00000458762 69 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 RNU6-126P-201ENST00000516685 103 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 AC109810.1-201ENST00000534066 224 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 AL360085.1-201ENST00000604713 532 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 MIR4791-201ENST00000607666 84 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 RMST_2.1-201ENST00000617263 136 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 AC012676.2-201ENST00000619258 186 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.97□□□□□ -2.25
RAB40ALP0C0E4 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 RNU6-847P-201ENST00000411115 108 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 RNU11-2P-201ENST00000516898 142 ntBASIC0.96□□□□□ -2.26
RAB40ALP0C0E4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 MIR489-201ENST00000384923 84 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 AC107297.1-201ENST00000459991 176 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 RNU6-365P-201ENST00000517113 106 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 AC023827.1-201ENST00000569247 97 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 MIR6788-201ENST00000618842 66 ntBASIC0.95□□□□□ -2.26
RAB40ALP0C0E4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.94□□□□□ -2.26
RAB40ALP0C0E4 SNORD115-28-201ENST00000363931 81 ntBASIC0.94□□□□□ -2.26
RAB40ALP0C0E4 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
RAB40ALP0C0E4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms