Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 snoU13.16-201ENST00000459350 104 ntBASIC0.98□□□□□ -2.25
HMGB1P09429 snoU13.21-201ENST00000459368 105 ntBASIC0.98□□□□□ -2.25
HMGB1P09429 AC134503.1-201ENST00000633048 54 ntBASIC0.98□□□□□ -2.25
HMGB1P09429 AC068700.1-201ENST00000565862 3754 ntBASIC0.98□□□□□ -2.25
HMGB1P09429 RNU6-806P-201ENST00000365147 105 ntBASIC0.97□□□□□ -2.25
HMGB1P09429 Y_RNA.494-201ENST00000384432 111 ntBASIC0.97□□□□□ -2.25
HMGB1P09429 MT-TN-201ENST00000387400 73 ntBASIC0.97□□□□□ -2.25
HMGB1P09429 SNORD83.1-201ENST00000411362 77 ntBASIC0.97□□□□□ -2.25
HMGB1P09429 AC006006.1-201ENST00000603082 144 ntBASIC0.97□□□□□ -2.25
HMGB1P09429 SNORD45.3-201ENST00000363836 72 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 SNORD115-28-201ENST00000363931 81 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 RNU4-10P-201ENST00000364383 140 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 RNU5E-4P-201ENST00000364931 120 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 RNU6-1138P-201ENST00000365359 106 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 MTCO2P12-201ENST00000427426 682 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
HMGB1P09429 RNU6-977P-201ENST00000516411 103 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGB1P09429 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGB1P09429 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
HMGB1P09429 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 Y_RNA.138-201ENST00000363462 102 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 Y_RNA.152-201ENST00000363578 100 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 Y_RNA.486-201ENST00000384398 107 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 MIR548P-201ENST00000408336 84 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 RNU6-693P-201ENST00000516134 107 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 MIR4662B-201ENST00000579498 81 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 MIR4264-201ENST00000583520 66 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 AL355297.3-201ENST00000604082 446 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 Y_RNA.802-201ENST00000614892 130 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 snoU18.1-201ENST00000629629 71 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
HMGB1P09429 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMGB1P09429 MIR377-201ENST00000362145 69 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 MIR337-201ENST00000362281 93 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-34-201ENST00000362441 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-12-201ENST00000362583 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-29-201ENST00000362834 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 Y_RNA.64-201ENST00000362845 102 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-9-201ENST00000362912 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-21-201ENST00000362963 81 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-14-201ENST00000363090 81 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-13-201ENST00000363358 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-41-201ENST00000363608 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-11-201ENST00000363616 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-5-201ENST00000363633 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 Y_RNA.158-201ENST00000363651 101 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-39-201ENST00000363694 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-4-201ENST00000363810 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-16-201ENST00000363887 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-6-201ENST00000363942 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-42-201ENST00000364273 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-15-201ENST00000364809 81 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 RNU6-867P-201ENST00000364956 107 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-1-201ENST00000364961 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-26-201ENST00000365067 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-10-201ENST00000365073 81 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-43-201ENST00000365503 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-36-201ENST00000365629 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 MIR520F-201ENST00000384824 87 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD77.4-201ENST00000516158 81 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 RNU4-54P-201ENST00000516428 129 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 RNA5SP121-201ENST00000516537 101 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORA27.4-201ENST00000516650 95 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 RNA5SP102-201ENST00000516865 106 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 MIR4771-2-201ENST00000577758 74 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 MIR4771-1-201ENST00000582617 74 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 SNORD115-40-201ENST00000606510 82 ntBASIC0.94□□□□□ -2.26
HMGB1P09429 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 AC090844.1-201ENST00000422019 156 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 Y_RNA.711-201ENST00000516993 102 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 AP003733.2-201ENST00000529409 171 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 AC113195.1-201ENST00000579952 141 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 AL008718.3-201ENST00000610217 321 ntBASIC0.93□□□□□ -2.26
HMGB1P09429 Y_RNA.16-201ENST00000362421 102 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 Y_RNA.26-201ENST00000362539 101 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 AC087499.4-201ENST00000448505 178 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 RNU6-1143P-201ENST00000516125 104 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 SCARNA24.2-201ENST00000516968 130 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 AC007751.1-201ENST00000529260 376 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 MIR3124-201ENST00000582636 67 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 Z83818.1-201ENST00000603584 150 ntBASIC0.92□□□□□ -2.26
HMGB1P09429 Y_RNA.216-201ENST00000364205 93 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 RNU6-580P-201ENST00000365159 107 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 MIR520H-201ENST00000385126 88 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 AC004941.2-201ENST00000427009 228 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 RNU7-62P-201ENST00000458856 62 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 MTCO2P24-201ENST00000515611 426 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 AC100767.1-201ENST00000528178 123 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.91□□□□□ -2.26
HMGB1P09429 AC108706.1-201ENST00000611053 297 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
HMGB1P09429 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
HMGB1P09429 Y_RNA.217-201ENST00000364214 105 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms