Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.75□□□□□ -2.29
VIMP08670 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
VIMP08670 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.75□□□□□ -2.29
VIMP08670 Y_RNA.84-201ENST00000363011 104 ntBASIC0.74□□□□□ -2.29
VIMP08670 Y_RNA.168-201ENST00000363740 102 ntBASIC0.74□□□□□ -2.29
VIMP08670 Y_RNA.202-201ENST00000364083 110 ntBASIC0.74□□□□□ -2.29
VIMP08670 RNU6-53P-201ENST00000365367 106 ntBASIC0.74□□□□□ -2.29
VIMP08670 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.74□□□□□ -2.29
VIMP08670 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.74□□□□□ -2.29
VIMP08670 MTCO2P24-201ENST00000515611 426 ntBASIC0.74□□□□□ -2.29
VIMP08670 SNORD77.4-201ENST00000516158 81 ntBASIC0.74□□□□□ -2.29
VIMP08670 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.74□□□□□ -2.29
VIMP08670 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.74□□□□□ -2.29
VIMP08670 MIR337-201ENST00000362281 93 ntBASIC0.73□□□□□ -2.29
VIMP08670 Y_RNA.241-201ENST00000364470 117 ntBASIC0.73□□□□□ -2.29
VIMP08670 Y_RNA.486-201ENST00000384398 107 ntBASIC0.73□□□□□ -2.29
VIMP08670 Y_RNA.494-201ENST00000384432 111 ntBASIC0.73□□□□□ -2.29
VIMP08670 MIR526A2-201ENST00000390198 65 ntBASIC0.73□□□□□ -2.29
VIMP08670 AC007751.1-201ENST00000529260 376 ntBASIC0.73□□□□□ -2.29
VIMP08670 AL356055.1-201ENST00000602528 446 ntBASIC0.73□□□□□ -2.29
VIMP08670 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
VIMP08670 UBE2WP1-201ENST00000362030 340 ntBASIC0.72□□□□□ -2.29
VIMP08670 Y_RNA.587-201ENST00000391210 103 ntBASIC0.72□□□□□ -2.29
VIMP08670 MIR1827-201ENST00000408549 66 ntBASIC0.72□□□□□ -2.29
VIMP08670 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
VIMP08670 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
VIMP08670 AL731563.1-201ENST00000442202 214 ntBASIC0.72□□□□□ -2.29
VIMP08670 AC107297.1-201ENST00000459991 176 ntBASIC0.72□□□□□ -2.29
VIMP08670 SERF1AP1-201ENST00000514575 187 ntBASIC0.72□□□□□ -2.29
VIMP08670 SCARNA24.2-201ENST00000516968 130 ntBASIC0.72□□□□□ -2.29
VIMP08670 Y_RNA.802-201ENST00000614892 130 ntBASIC0.72□□□□□ -2.29
VIMP08670 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
VIMP08670 MIR1-1-201ENST00000362147 71 ntBASIC0.71□□□□□ -2.3
VIMP08670 SNORD45.3-201ENST00000363836 72 ntBASIC0.71□□□□□ -2.3
VIMP08670 SNORD115-28-201ENST00000363931 81 ntBASIC0.71□□□□□ -2.3
VIMP08670 RNU6-125P-201ENST00000384505 107 ntBASIC0.71□□□□□ -2.3
VIMP08670 MT-TN-201ENST00000387400 73 ntBASIC0.71□□□□□ -2.3
VIMP08670 RNU6-205P-201ENST00000390858 107 ntBASIC0.71□□□□□ -2.3
VIMP08670 TRMT112P2-201ENST00000512910 132 ntBASIC0.71□□□□□ -2.3
VIMP08670 RNU6-1338P-201ENST00000516328 91 ntBASIC0.71□□□□□ -2.3
VIMP08670 Y_RNA.701-201ENST00000516812 110 ntBASIC0.71□□□□□ -2.3
VIMP08670 AC004817.2-201ENST00000561794 651 ntBASIC0.71□□□□□ -2.3
VIMP08670 MIR4662B-201ENST00000579498 81 ntBASIC0.71□□□□□ -2.3
VIMP08670 AC006006.1-201ENST00000603082 144 ntBASIC0.71□□□□□ -2.3
VIMP08670 SNORD115-34-201ENST00000362441 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-12-201ENST00000362583 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-29-201ENST00000362834 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-9-201ENST00000362912 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-21-201ENST00000362963 81 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-14-201ENST00000363090 81 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-13-201ENST00000363358 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-41-201ENST00000363608 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-11-201ENST00000363616 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-5-201ENST00000363633 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-39-201ENST00000363694 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-4-201ENST00000363810 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-16-201ENST00000363887 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-6-201ENST00000363942 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-42-201ENST00000364273 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-15-201ENST00000364809 81 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-1-201ENST00000364961 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-26-201ENST00000365067 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-10-201ENST00000365073 81 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORA33.2-201ENST00000365413 134 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-43-201ENST00000365503 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-36-201ENST00000365629 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORA24-201ENST00000384096 131 ntBASIC0.7□□□□□ -2.3
VIMP08670 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
VIMP08670 Y_RNA.572-201ENST00000384757 98 ntBASIC0.7□□□□□ -2.3
VIMP08670 RNU6-985P-201ENST00000410182 104 ntBASIC0.7□□□□□ -2.3
VIMP08670 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.7□□□□□ -2.3
VIMP08670 RNU7-67P-201ENST00000459003 62 ntBASIC0.7□□□□□ -2.3
VIMP08670 RNU6-570P-201ENST00000517051 105 ntBASIC0.7□□□□□ -2.3
VIMP08670 MIR4769-201ENST00000584126 77 ntBASIC0.7□□□□□ -2.3
VIMP08670 AP000753.3-201ENST00000604083 169 ntBASIC0.7□□□□□ -2.3
VIMP08670 SNORD115-40-201ENST00000606510 82 ntBASIC0.7□□□□□ -2.3
VIMP08670 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
VIMP08670 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
VIMP08670 Y_RNA.24-201ENST00000362508 103 ntBASIC0.69□□□□□ -2.3
VIMP08670 Y_RNA.376-201ENST00000365638 108 ntBASIC0.69□□□□□ -2.3
VIMP08670 RNU6-211P-201ENST00000384047 107 ntBASIC0.69□□□□□ -2.3
VIMP08670 RNU6-1203P-201ENST00000410703 110 ntBASIC0.69□□□□□ -2.3
VIMP08670 AC090844.1-201ENST00000422019 156 ntBASIC0.69□□□□□ -2.3
VIMP08670 MTCYBP6-201ENST00000441810 138 ntBASIC0.69□□□□□ -2.3
VIMP08670 snoU13.16-201ENST00000459350 104 ntBASIC0.69□□□□□ -2.3
VIMP08670 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
VIMP08670 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
VIMP08670 RNU6-693P-201ENST00000516134 107 ntBASIC0.69□□□□□ -2.3
VIMP08670 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
VIMP08670 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.69□□□□□ -2.3
VIMP08670 MIR4498-201ENST00000577599 66 ntBASIC0.69□□□□□ -2.3
VIMP08670 MIR5688-201ENST00000580619 83 ntBASIC0.69□□□□□ -2.3
VIMP08670 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
VIMP08670 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
VIMP08670 RNU6-580P-201ENST00000365159 107 ntBASIC0.68□□□□□ -2.3
VIMP08670 RNU6-1289P-201ENST00000384431 106 ntBASIC0.68□□□□□ -2.3
VIMP08670 SNORA8.3-201ENST00000384679 139 ntBASIC0.68□□□□□ -2.3
VIMP08670 MIR518F-201ENST00000384973 87 ntBASIC0.68□□□□□ -2.3
VIMP08670 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
VIMP08670 AC113618.1-201ENST00000416747 285 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms