Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 SNORA36B-201ENST00000410438 131 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 AC096644.2-201ENST00000429278 159 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 MIR18B-201ENST00000454574 71 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 Y_RNA.635-201ENST00000459041 101 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 AC010205.1-201ENST00000616668 449 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.13□□□□□ -2.39
COL4A2P08572 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 RNU6-144P-201ENST00000383951 107 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 Y_RNA.428-201ENST00000384078 102 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 Y_RNA.570-201ENST00000384750 101 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 MIR628-201ENST00000385229 95 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 RNU6-370P-201ENST00000411008 104 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 RPS29P8-201ENST00000445109 171 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 RNU6-437P-201ENST00000459408 95 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.13□□□□□ -2.39
COL4A2P08572 RNU6-966P-201ENST00000516479 104 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 AC008507.4-201ENST00000585464 127 ntBASIC0.13□□□□□ -2.39
COL4A2P08572 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
COL4A2P08572 MIR604-201ENST00000384880 94 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-1319P-201ENST00000390855 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-205P-201ENST00000390858 107 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-747P-201ENST00000390928 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 SNORA40.5-201ENST00000391061 128 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-241P-201ENST00000391148 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-447P-201ENST00000410293 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-1118P-201ENST00000410382 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-1076P-201ENST00000410397 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-355P-201ENST00000410427 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-791P-201ENST00000410467 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-705P-201ENST00000410601 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-1100P-201ENST00000410691 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-860P-201ENST00000410860 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-1217P-201ENST00000411276 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 RNU6-785P-201ENST00000411324 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 U8.20-201ENST00000459445 131 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 SNORA68.3-201ENST00000515906 83 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 MIR4771-2-201ENST00000577758 74 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 MIR3612-201ENST00000579753 87 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 AC090897.1-201ENST00000580909 226 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 MIR4771-1-201ENST00000582617 74 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 U6.90-201ENST00000614007 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 U6.70-201ENST00000620287 104 ntBASIC0.12□□□□□ -2.39
COL4A2P08572 SNORD81.1-201ENST00000363064 77 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 Y_RNA.166-201ENST00000363730 102 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 RNU6-708P-201ENST00000384217 107 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 Y_RNA.494-201ENST00000384432 111 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR125B2-201ENST00000385128 89 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR1278-201ENST00000408753 81 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR1468-201ENST00000410600 86 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 SNORD83.1-201ENST00000411362 77 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 AC236972.2-201ENST00000434979 310 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 AC022306.2-201ENST00000617563 647 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR548AY-201ENST00000617669 107 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 AC022140.2-201ENST00000623500 188 ntBASIC0.11□□□□□ -2.39
COL4A2P08572 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 SNORD81.2-201ENST00000365153 76 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNA5SP117-201ENST00000365294 118 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.383-201ENST00000383855 97 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.387-201ENST00000383918 102 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 FGF7P6-202ENST00000451282 293 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNU7-73P-201ENST00000458743 63 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNU7-141P-201ENST00000459304 62 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 SEPT14P8-201ENST00000508026 178 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNU6-559P-201ENST00000516151 98 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.691-201ENST00000516611 103 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.700-201ENST00000516806 100 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNU7-110P-201ENST00000516891 62 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.713-201ENST00000517013 96 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.1□□□□□ -2.39
COL4A2P08572 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.1□□□□□ -2.39
COL4A2P08572 AC138305.3-201ENST00000624988 240 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 U6.92-201ENST00000636464 89 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 SNORD114-31-201ENST00000363219 75 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 MIR938-201ENST00000401216 83 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 SNORD100-201ENST00000408573 76 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.1□□□□□ -2.39
COL4A2P08572 Y_RNA.718-201ENST00000517110 102 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 AC100767.1-201ENST00000528178 123 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.1□□□□□ -2.39
COL4A2P08572 AC127455.1-201ENST00000565496 145 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 RPS29P30-201ENST00000600975 111 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
COL4A2P08572 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 SNORA72.1-201ENST00000363485 129 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 Y_RNA.143-201ENST00000363520 106 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 SNORD45.3-201ENST00000363836 72 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 Y_RNA.187-201ENST00000363918 113 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 RNY1P8-201ENST00000383970 114 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 RNU6-890P-201ENST00000384121 107 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 AL603910.2-201ENST00000407268 136 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 SNORD11-201ENST00000459124 84 ntBASIC0.09□□□□□ -2.4
COL4A2P08572 RNU6-693P-201ENST00000516134 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms