Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 Y_RNA.122-201ENST00000363331 96 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.136-201ENST00000363444 102 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 RNU6-934P-201ENST00000365154 107 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.354-201ENST00000365448 111 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 RNY3P14-201ENST00000384309 102 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 RNU6-177P-201ENST00000411257 104 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.36□□□□□ -2.35
HLA-DPB1P04440 BTF3P11-201ENST00000426582 477 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MTCO1P5-201ENST00000433573 344 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MTND4P19-201ENST00000446659 478 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.36□□□□□ -2.35
HLA-DPB1P04440 SCARNA8-201ENST00000515924 131 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.666-201ENST00000516187 112 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 RNU7-149P-201ENST00000516739 59 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MIR4771-2-201ENST00000577758 74 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 MIR4771-1-201ENST00000582617 74 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 AL049861.1-201ENST00000603130 150 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 AC020891.4-201ENST00000605745 93 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 uc_338.4-201ENST00000616635 176 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
HLA-DPB1P04440 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
HLA-DPB1P04440 MIR369-201ENST00000362155 70 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-1205P-201ENST00000363625 106 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-450P-201ENST00000364654 107 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.395-201ENST00000383945 109 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 SNORA24-201ENST00000384096 131 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 SNORD115-46-201ENST00000390982 71 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-1248P-201ENST00000391096 64 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-121P-201ENST00000410525 99 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.35□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.639-201ENST00000458981 102 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 RNU6-1007P-201ENST00000516586 107 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 C8orf59P2-201ENST00000603441 271 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 AP000753.3-201ENST00000604083 169 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 AL133255.1-201ENST00000606374 441 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.35□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.804-201ENST00000615262 101 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 MIR5087-201ENST00000635826 76 ntBASIC0.35□□□□□ -2.35
HLA-DPB1P04440 Y_RNA.241-201ENST00000364470 117 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.419-201ENST00000384041 102 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.424-201ENST00000384063 103 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.445-201ENST00000384168 102 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.569-201ENST00000384749 103 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
HLA-DPB1P04440 RNU6-897P-201ENST00000517135 105 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.34□□□□□ -2.36
HLA-DPB1P04440 AC124312.5-201ENST00000604451 268 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 AC013791.1-201ENST00000616619 62 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 MIR6515-201ENST00000619843 57 ntBASIC0.34□□□□□ -2.36
HLA-DPB1P04440 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HLA-DPB1P04440 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.183-201ENST00000363882 113 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 RNU6-144P-201ENST00000383951 107 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 RNU7-62P-201ENST00000458856 62 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 snoU13.16-201ENST00000459350 104 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
HLA-DPB1P04440 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU4-90P-201ENST00000362773 141 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU6-1272P-201ENST00000362776 107 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.242-201ENST00000364473 110 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU6-1138P-201ENST00000365359 106 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD42.2-201ENST00000365570 69 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.486-201ENST00000384398 107 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms