Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-1170P-201ENST00000515974 106 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 Y_RNA.661-201ENST00000516003 99 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 SNORA40.14-201ENST00000516543 86 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 AC090897.1-201ENST00000580909 226 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 SNORD115-40-201ENST00000606510 82 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 AL606534.2-204ENST00000635008 178 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 AL589743.1-201ENST00000551932 2712 ntBASIC0.15□□□□□ -2.39
MT-ND4P03905 Y_RNA.187-201ENST00000363918 113 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 SNORA40.8-201ENST00000411034 126 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 RNU6-130P-201ENST00000411112 103 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 Y_RNA.666-201ENST00000516187 112 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 RNU6-191P-201ENST00000516295 94 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 RNU7-149P-201ENST00000516739 59 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 RNA5SP94-201ENST00000516917 108 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 AC007751.1-201ENST00000529260 376 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 AC022523.2-201ENST00000561045 150 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 AL138825.1-201ENST00000618587 192 ntBASIC0.14□□□□□ -2.39
MT-ND4P03905 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
MT-ND4P03905 RNU6-899P-201ENST00000363947 107 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORA63C-201ENST00000364578 129 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 Y_RNA.418-201ENST00000384029 102 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORD38B-201ENST00000384690 67 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 MIR125B2-201ENST00000385128 89 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 RNU6-763P-201ENST00000390865 106 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 RNU6-1248P-201ENST00000391096 64 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 RNU6-383P-201ENST00000410864 94 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 Y_RNA.619-201ENST00000410951 90 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORD71-201ENST00000411292 86 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 MIR18B-201ENST00000454574 71 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 RNU7-102P-201ENST00000458948 62 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 Y_RNA.632-201ENST00000459189 102 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SEPT14P8-201ENST00000508026 178 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.13□□□□□ -2.39
MT-ND4P03905 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.13□□□□□ -2.39
MT-ND4P03905 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 AP000942.4-201ENST00000604811 241 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORA25.18-201ENST00000607153 114 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORD113-5-201ENST00000607261 78 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 AL021707.8-201ENST00000609428 183 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 MIR8055-201ENST00000610739 97 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 AL132765.2-201ENST00000610812 351 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 PART1_1.1-201ENST00000611761 217 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 SNORD38B-202ENST00000625943 69 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 AC099654.14-201ENST00000638599 341 ntBASIC0.13□□□□□ -2.39
MT-ND4P03905 Y_RNA.5-201ENST00000362334 102 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNA5SP62-201ENST00000363457 110 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 Y_RNA.252-201ENST00000364556 101 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU1-115P-201ENST00000365329 160 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 Y_RNA.354-201ENST00000365448 111 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 Y_RNA.471-201ENST00000384312 102 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU6-364P-201ENST00000384387 107 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 MIR588-201ENST00000384900 83 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 MIR518F-201ENST00000384973 87 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU6-1165P-201ENST00000410119 107 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 HMGN1P33-201ENST00000432945 451 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 AC023449.1-201ENST00000454464 154 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU7-73P-201ENST00000458743 63 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU7-185P-201ENST00000459215 60 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 Y_RNA.713-201ENST00000517013 96 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 AL049861.1-201ENST00000603130 150 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 AC022709.1-201ENST00000615967 87 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 Z97988.1-201ENST00000637697 135 ntBASIC0.12□□□□□ -2.39
MT-ND4P03905 RNU6-1205P-201ENST00000363625 106 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 SNORD115-28-201ENST00000363931 81 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 Y_RNA.222-201ENST00000364264 102 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 Y_RNA.390-201ENST00000383932 102 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-144P-201ENST00000383951 107 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-1319P-201ENST00000390855 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-747P-201ENST00000390928 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-241P-201ENST00000391148 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-447P-201ENST00000410293 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-1118P-201ENST00000410382 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-1076P-201ENST00000410397 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-355P-201ENST00000410427 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-791P-201ENST00000410467 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-705P-201ENST00000410601 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-1100P-201ENST00000410691 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-860P-201ENST00000410860 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-1217P-201ENST00000411276 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-938P-201ENST00000411285 103 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-785P-201ENST00000411324 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.11□□□□□ -2.39
MT-ND4P03905 RNU6-764P-201ENST00000516396 105 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.11□□□□□ -2.39
MT-ND4P03905 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.11□□□□□ -2.39
MT-ND4P03905 SNORD92-201ENST00000585078 85 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 U6.90-201ENST00000614007 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 U6.70-201ENST00000620287 104 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 MIR6734-201ENST00000621166 68 ntBASIC0.11□□□□□ -2.39
MT-ND4P03905 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNU6-1138P-201ENST00000365359 106 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNU6-42P-201ENST00000384165 107 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 SNORA8.2-201ENST00000384372 139 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNY1P14-201ENST00000384426 108 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms