Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.2□□□□□ -2.38
CPSF4O95639 Y_RNA.666-201ENST00000516187 112 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 RNU6-764P-201ENST00000516396 105 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 RNU6-958P-201ENST00000516995 106 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 AC006157.1-201ENST00000611750 366 ntBASIC0.2□□□□□ -2.38
CPSF4O95639 SNORD115-34-201ENST00000362441 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-12-201ENST00000362583 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 Y_RNA.58-201ENST00000362807 102 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-29-201ENST00000362834 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-9-201ENST00000362912 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-21-201ENST00000362963 81 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-14-201ENST00000363090 81 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-13-201ENST00000363358 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD113-8-201ENST00000363497 74 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-41-201ENST00000363608 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-11-201ENST00000363616 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 Y_RNA.154-201ENST00000363624 102 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-5-201ENST00000363633 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-39-201ENST00000363694 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-4-201ENST00000363810 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-16-201ENST00000363887 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-6-201ENST00000363942 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-42-201ENST00000364273 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-15-201ENST00000364809 81 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-1-201ENST00000364961 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-26-201ENST00000365067 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-10-201ENST00000365073 81 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 RNY3P1-201ENST00000365085 102 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 Y_RNA.315-201ENST00000365117 102 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 RNU4-45P-201ENST00000365469 141 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-43-201ENST00000365503 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-36-201ENST00000365629 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 RNU6-42P-201ENST00000384165 107 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 RNU6-102P-201ENST00000384485 104 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 MIR1287-201ENST00000408492 90 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AC023449.1-201ENST00000454464 154 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AC007751.1-201ENST00000529260 376 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.19□□□□□ -2.38
CPSF4O95639 AL049861.1-201ENST00000603130 150 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AL355297.3-201ENST00000604082 446 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 SNORD115-40-201ENST00000606510 82 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AL021707.8-201ENST00000609428 183 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 MIR6740-201ENST00000618268 113 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 AC092634.7-201ENST00000621022 103 ntBASIC0.19□□□□□ -2.38
CPSF4O95639 Y_RNA.136-201ENST00000363444 102 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 Y_RNA.303-201ENST00000364998 94 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 Y_RNA.356-201ENST00000365475 113 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 RNU6-144P-201ENST00000383951 107 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 RNU6-913P-201ENST00000390913 95 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 Y_RNA.602-201ENST00000410535 92 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
CPSF4O95639 HSPE1P25-201ENST00000455484 251 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 Y_RNA.637-201ENST00000459424 114 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 MRPS35P2-201ENST00000508242 191 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 SNORA18.4-201ENST00000516440 124 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 RNU6-875P-201ENST00000516488 106 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.18□□□□□ -2.38
CPSF4O95639 AC007485.1-201ENST00000616755 206 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 AC010332.2-201ENST00000613083 1904 ntBASIC0.18□□□□□ -2.38
CPSF4O95639 SNORD115-28-201ENST00000363931 81 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 Y_RNA.226-201ENST00000364337 114 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 SNORA63C-201ENST00000364578 129 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 RNU6-1138P-201ENST00000365359 106 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 SNORD38B-201ENST00000384690 67 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR216A-201ENST00000385063 110 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
CPSF4O95639 MIR938-201ENST00000401216 83 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR1302-11-201ENST00000408051 138 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR1302-9-201ENST00000408365 138 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR1302-10-201ENST00000408734 138 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 RNU6-938P-201ENST00000411285 103 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.17□□□□□ -2.38
CPSF4O95639 RNU6-475P-201ENST00000516073 104 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 C8orf59P2-201ENST00000603441 271 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 AC008608.1-201ENST00000603910 127 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 AP000942.4-201ENST00000604811 241 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR1302-2-201ENST00000607096 138 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR8055-201ENST00000610739 97 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR376A1-201ENST00000616574 68 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 AC013791.1-201ENST00000616619 62 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 SNORD38B-202ENST00000625943 69 ntBASIC0.17□□□□□ -2.38
CPSF4O95639 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.14-201ENST00000362415 103 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.116-201ENST00000363292 103 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.197-201ENST00000364004 102 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.238-201ENST00000364441 102 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 RNA5SP517-201ENST00000364724 117 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.486-201ENST00000384398 107 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.569-201ENST00000384749 103 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 MIR588-201ENST00000384900 83 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 Y_RNA.579-201ENST00000390939 94 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 RNA5SP496-201ENST00000391240 109 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 HMGN1P33-201ENST00000432945 451 ntBASIC0.16□□□□□ -2.38
CPSF4O95639 MTCO1P5-201ENST00000433573 344 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms