Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNU6-958P-201ENST00000516995 106 ntBASIC0.05□□□□□ -2.4
NPHP4O75161 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
NPHP4O75161 SNORD118-201ENST00000363593 134 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 SNORD100-201ENST00000408573 76 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 RNU7-67P-201ENST00000459003 62 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 RNU6-437P-201ENST00000459408 95 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 MIR3678-201ENST00000578455 94 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 AC090897.1-201ENST00000580909 226 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 AC134878.1-201ENST00000619901 243 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
NPHP4O75161 RNU4-73P-201ENST00000363164 141 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 RNU4-50P-201ENST00000364361 141 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 SNORA8.2-201ENST00000384372 139 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 Y_RNA.547-201ENST00000384654 119 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 SNORD11-201ENST00000459124 84 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 RNU7-141P-201ENST00000459304 62 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 AC104692.1-201ENST00000472406 90 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 AP001180.6-201ENST00000584918 159 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 AL080274.1-201ENST00000605565 220 ntBASIC0.04□□□□□ -2.4
NPHP4O75161 Y_RNA.27-201ENST00000362540 103 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 MIR518F-201ENST00000384973 87 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 MIR125B2-201ENST00000385128 89 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-1319P-201ENST00000390855 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-747P-201ENST00000390928 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-241P-201ENST00000391148 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU4-30P-201ENST00000410245 143 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 Y_RNA.635-201ENST00000459041 101 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 snoU13.16-201ENST00000459350 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 AC010655.3-201ENST00000478818 450 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-358P-201ENST00000516564 75 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU7-156P-201ENST00000517214 74 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.41
NPHP4O75161 RNU6-623P-201ENST00000363143 105 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 Y_RNA.241-201ENST00000364470 117 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 Y_RNA.567-201ENST00000384736 106 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 RNU6-913P-201ENST00000390913 95 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.02□□□□□ -2.41
NPHP4O75161 RNU7-185P-201ENST00000459215 60 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 RNU7-110P-201ENST00000516891 62 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 MIR4423-201ENST00000580922 80 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 MIR2681-201ENST00000581814 105 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.02□□□□□ -2.41
NPHP4O75161 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.01□□□□□ -2.41
NPHP4O75161 Y_RNA.142-201ENST00000363491 102 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 SNORD38B-201ENST00000384690 67 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 MIR588-201ENST00000384900 83 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 MIR548O-201ENST00000408583 114 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 RNU6-699P-201ENST00000517081 110 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.01□□□□□ -2.41
NPHP4O75161 AC133485.4-201ENST00000561835 220 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 AC006600.1-201ENST00000572529 153 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 MIR5690-201ENST00000583739 73 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 AC108676.2-201ENST00000605225 163 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 SNORD38B-202ENST00000625943 69 ntBASIC0.01□□□□□ -2.41
NPHP4O75161 RNU6-845P-201ENST00000362578 103 ntBASIC0□□□□□ -2.41
NPHP4O75161 RNU6-1309P-201ENST00000363305 108 ntBASIC0□□□□□ -2.41
NPHP4O75161 SNORA36.1-201ENST00000363424 132 ntBASIC0□□□□□ -2.41
NPHP4O75161 RNU6-674P-201ENST00000363831 107 ntBASIC0□□□□□ -2.41
NPHP4O75161 RNU6-801P-201ENST00000364087 105 ntBASIC0□□□□□ -2.41
NPHP4O75161 Y_RNA.813-201ENST00000364639 102 ntBASIC0□□□□□ -2.41
NPHP4O75161 RNA5SP117-201ENST00000365294 118 ntBASIC0□□□□□ -2.41
NPHP4O75161 MIR604-201ENST00000384880 94 ntBASIC0□□□□□ -2.41
NPHP4O75161 PDCL2P1-201ENST00000419302 352 ntBASIC0□□□□□ -2.41
NPHP4O75161 AC024067.1-201ENST00000426199 223 ntBASIC0□□□□□ -2.41
NPHP4O75161 AC107297.1-201ENST00000459991 176 ntBASIC0□□□□□ -2.41
NPHP4O75161 Y_RNA.666-201ENST00000516187 112 ntBASIC0□□□□□ -2.41
NPHP4O75161 Y_RNA.691-201ENST00000516611 103 ntBASIC0□□□□□ -2.41
NPHP4O75161 AC005357.1-201ENST00000588399 301 ntBASIC0□□□□□ -2.41
NPHP4O75161 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
NPHP4O75161 AC011373.1-201ENST00000607270 237 ntBASIC0□□□□□ -2.41
NPHP4O75161 MIR4315-1-201ENST00000636800 73 ntBASIC0□□□□□ -2.41
NPHP4O75161 MIR4315-2-201ENST00000640925 73 ntBASIC0□□□□□ -2.41
NPHP4O75161 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 SNORA24-201ENST00000384096 131 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 MIR559-201ENST00000385188 96 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 FCF1P9-201ENST00000412546 282 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.01□□□□□ -2.41
NPHP4O75161 MIR18B-201ENST00000454574 71 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 AL355297.3-201ENST00000604082 446 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.01□□□□□ -2.41
NPHP4O75161 AC022306.2-201ENST00000617563 647 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 uc_338.16-201ENST00000621804 95 ntBASIC-0.01□□□□□ -2.41
NPHP4O75161 SNORD95.1-201ENST00000364099 68 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms