Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL160004.2-201ENST00000432935 350 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 RNU6-191P-201ENST00000516295 94 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 MIR1273G-201ENST00000577677 100 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 AL049861.1-201ENST00000603130 150 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 AP000753.3-201ENST00000604083 169 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.23□□□□□ -2.37
CHMP2AO43633 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 uc_338.4-201ENST00000616635 176 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 MIR6779-201ENST00000617283 64 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 Y_RNA.376-201ENST00000365638 108 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 Y_RNA.471-201ENST00000384312 102 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 MT-TN-201ENST00000387400 73 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 RNU6-938P-201ENST00000411285 103 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 POLR2KP2-201ENST00000438155 177 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 RBMX2P4-201ENST00000441256 376 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 MRPS35P2-201ENST00000508242 191 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 RNU6-397P-201ENST00000516226 104 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 AC007485.1-201ENST00000616755 206 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 AC134878.1-201ENST00000619901 243 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 AC022140.2-201ENST00000623500 188 ntBASIC0.22□□□□□ -2.37
CHMP2AO43633 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.21□□□□□ -2.38
CHMP2AO43633 Y_RNA.241-201ENST00000364470 117 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 Y_RNA.303-201ENST00000364998 94 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 Y_RNA.315-201ENST00000365117 102 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 Y_RNA.439-201ENST00000384119 94 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 Y_RNA.466-201ENST00000384294 113 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 AL358176.2-201ENST00000425769 204 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.21□□□□□ -2.38
CHMP2AO43633 RNU7-67P-201ENST00000459003 62 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 SNORA18.4-201ENST00000516440 124 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 RNU7-149P-201ENST00000516739 59 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 MIR4264-201ENST00000583520 66 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 AL121655.1-201ENST00000605811 308 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 AC133104.2-201ENST00000615272 193 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.21□□□□□ -2.38
CHMP2AO43633 AL606534.2-204ENST00000635008 178 ntBASIC0.21□□□□□ -2.38
CHMP2AO43633 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU4-10P-201ENST00000364383 140 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU6-1283P-201ENST00000365314 105 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 SNORD63-201ENST00000384262 68 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 Y_RNA.529-201ENST00000384586 119 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CHMP2AO43633 Y_RNA.602-201ENST00000410535 92 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 AL138752.1-201ENST00000452964 351 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU7-102P-201ENST00000458948 62 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU7-152P-201ENST00000458982 64 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 Y_RNA.637-201ENST00000459424 114 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 SNORD19B-201ENST00000459623 84 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU6-507P-201ENST00000516045 100 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RNU6-764P-201ENST00000516396 105 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 RPS29P30-201ENST00000600975 111 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 AC099654.14-201ENST00000638599 341 ntBASIC0.2□□□□□ -2.38
CHMP2AO43633 Y_RNA.39-201ENST00000362620 98 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 Y_RNA.105-201ENST00000363182 111 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 RNU6-1309P-201ENST00000363305 108 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 Y_RNA.187-201ENST00000363918 113 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORA1.2-201ENST00000365189 134 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORA24-201ENST00000384096 131 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORD12C-201ENST00000386307 89 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 AC024067.1-201ENST00000426199 223 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 HSPE1P25-201ENST00000455484 251 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 RNU6-1170P-201ENST00000515974 106 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORD36C-201ENST00000516733 66 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 AC040926.1-201ENST00000530195 238 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 MIR2681-201ENST00000581814 105 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 AC006157.1-201ENST00000611750 366 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 AC122108.2-201ENST00000611946 526 ntBASIC0.19□□□□□ -2.38
CHMP2AO43633 SNORD113-8-201ENST00000363497 74 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 Y_RNA.384-201ENST00000383909 102 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 Y_RNA.486-201ENST00000384398 107 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 Y_RNA.572-201ENST00000384757 98 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 MIR588-201ENST00000384900 83 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 MIR518F-201ENST00000384973 87 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.18□□□□□ -2.38
CHMP2AO43633 U8.20-201ENST00000459445 131 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 RNA5SP94-201ENST00000516917 108 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 AL021707.8-201ENST00000609428 183 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 AC112487.2-201ENST00000637950 304 ntBASIC0.18□□□□□ -2.38
CHMP2AO43633 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 Y_RNA.505-201ENST00000384489 102 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 MIR548A2-201ENST00000384956 97 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 MIR938-201ENST00000401216 83 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 RNU7-185P-201ENST00000459215 60 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 snoU13.16-201ENST00000459350 104 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 SCARNA8-201ENST00000515924 131 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.17□□□□□ -2.38
CHMP2AO43633 MIR8055-201ENST00000610739 97 ntBASIC0.17□□□□□ -2.38
CHMP2AO43633 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
CHMP2AO43633 RNU6-1205P-201ENST00000363625 106 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms