Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNA5SP47-201ENST00000517230 109 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 MIR3152-201ENST00000579801 74 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 MIR548AY-201ENST00000617669 107 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 RNU6-674P-201ENST00000363831 107 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 SNORD93-201ENST00000408813 74 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 HMGN2P22-201ENST00000427588 175 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 RNU6-504P-201ENST00000516568 104 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 AC109635.3-201ENST00000529536 185 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 AC138869.1-201ENST00000568623 124 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 MIR3974-201ENST00000637126 96 ntBASIC-0.46□□□□□ -2.48
SGCEO43556 MIR30D-201ENST00000362283 70 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RNY3P4-201ENST00000384428 101 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 SNORD78.2-201ENST00000391076 69 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RNA5SP163-201ENST00000410304 99 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RNU4-83P-201ENST00000410863 133 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 MTND1P2-201ENST00000430604 821 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RNU6-437P-201ENST00000459408 95 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RNU7-25P-201ENST00000516544 62 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 MIR3681-201ENST00000580089 72 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 AC245008.1-201ENST00000608123 476 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 RN7SL660P-201ENST00000614852 299 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 MIR8066-201ENST00000617280 78 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
SGCEO43556 MTND5P32-201ENST00000560711 1802 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 SNORD116-9-201ENST00000384000 95 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 SNORD116-3-201ENST00000384287 95 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 SNORD116-7-201ENST00000384404 95 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 SNORD116-5-201ENST00000384462 95 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 SNORA8.3-201ENST00000384679 139 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 MIR625-201ENST00000385047 85 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNU6-913P-201ENST00000390913 95 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNA5SP118-201ENST00000410385 109 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNU6-602P-201ENST00000411155 105 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 FCF1P9-201ENST00000412546 282 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 AC087499.4-201ENST00000448505 178 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNA5SP285-201ENST00000516619 119 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNU6-180P-201ENST00000516697 61 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RN7SKP295-201ENST00000517264 153 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.48□□□□□ -2.49
SGCEO43556 AP000942.4-201ENST00000604811 241 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 FTX_2.1-201ENST00000618816 94 ntBASIC-0.48□□□□□ -2.49
SGCEO43556 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 SNORA40.5-201ENST00000391061 128 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 MIR548O-201ENST00000408583 114 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 RNU6-966P-201ENST00000516479 104 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 MIR4752-201ENST00000579672 72 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 MIR3666-201ENST00000607845 111 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 PISRT1.1-201ENST00000616930 107 ntBASIC-0.49□□□□□ -2.49
SGCEO43556 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
SGCEO43556 RNU6-99P-201ENST00000364721 107 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNU6-740P-201ENST00000364734 105 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 MIR501-201ENST00000390204 84 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNA5SP300-201ENST00000391197 107 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNA5SP451-201ENST00000410588 110 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RPL39P25-201ENST00000449384 154 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 AC098826.2-201ENST00000452011 651 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 AC023449.1-201ENST00000454464 154 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 SNORD11-201ENST00000459124 84 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.5□□□□□ -2.49
SGCEO43556 RPL7P42-201ENST00000481005 679 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.5□□□□□ -2.49
SGCEO43556 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.5□□□□□ -2.49
SGCEO43556 RNA5SP257-201ENST00000363023 116 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 SNORD28-201ENST00000384706 75 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 MIR7-2-201ENST00000384970 110 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 AL590004.1-201ENST00000405321 300 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 MIR1278-201ENST00000408753 81 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 SNORA36B-201ENST00000410438 131 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 AF228730.4-201ENST00000421457 183 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 AC091951.2-201ENST00000500762 203 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 SNORA31.14-201ENST00000516728 116 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 AP001180.6-201ENST00000584918 159 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 MIR4639-201ENST00000584938 69 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 AC087588.2-201ENST00000617667 426 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.51□□□□□ -2.49
SGCEO43556 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 RNU4-50P-201ENST00000364361 141 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 MIR215-201ENST00000384858 110 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms