Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SHOXO15266 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SHOXO15266 SNORA63.4-201ENST00000362763 126 ntBASIC2.31□□□□□ -2.04
SHOXO15266 RNA5SP374-201ENST00000362939 125 ntBASIC2.31□□□□□ -2.04
SHOXO15266 Y_RNA.198-201ENST00000364013 98 ntBASIC2.31□□□□□ -2.04
SHOXO15266 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
SHOXO15266 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOXO15266 RNY4P20-201ENST00000516678 93 ntBASIC2.31□□□□□ -2.04
SHOXO15266 RNU7-181P-201ENST00000517234 74 ntBASIC2.31□□□□□ -2.04
SHOXO15266 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
SHOXO15266 MIR3683-201ENST00000580847 82 ntBASIC2.31□□□□□ -2.04
SHOXO15266 MIR4435-1-201ENST00000582552 80 ntBASIC2.31□□□□□ -2.04
SHOXO15266 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.31□□□□□ -2.04
SHOXO15266 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
SHOXO15266 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.31□□□□□ -2.04
SHOXO15266 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHOXO15266 AL391516.1-201ENST00000554380 2449 ntBASIC2.31□□□□□ -2.04
SHOXO15266 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHOXO15266 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
SHOXO15266 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNU6-1123P-201ENST00000362347 106 ntBASIC2.3□□□□□ -2.04
SHOXO15266 Y_RNA.370-201ENST00000365589 108 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNU6-1067P-201ENST00000384752 107 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
SHOXO15266 AC093850.1-201ENST00000454121 251 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNU7-164P-201ENST00000459221 62 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNA5SP57-201ENST00000459463 123 ntBASIC2.3□□□□□ -2.04
SHOXO15266 UBL5P3-201ENST00000475112 231 ntBASIC2.3□□□□□ -2.04
SHOXO15266 AC099513.1-201ENST00000490423 301 ntBASIC2.3□□□□□ -2.04
SHOXO15266 RNU7-53P-201ENST00000516705 60 ntBASIC2.3□□□□□ -2.04
SHOXO15266 SNORA31.17-201ENST00000516953 127 ntBASIC2.3□□□□□ -2.04
SHOXO15266 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.3□□□□□ -2.04
SHOXO15266 RNY4P6-201ENST00000363667 96 ntBASIC2.29□□□□□ -2.04
SHOXO15266 Y_RNA.298-201ENST00000364960 107 ntBASIC2.29□□□□□ -2.04
SHOXO15266 RPS12P2-201ENST00000439728 269 ntBASIC2.29□□□□□ -2.04
SHOXO15266 AC007012.1-201ENST00000567192 175 ntBASIC2.29□□□□□ -2.04
SHOXO15266 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOXO15266 AC002984.1-201ENST00000591692 448 ntBASIC2.29□□□□□ -2.04
SHOXO15266 AC096644.4-201ENST00000563417 2912 ntBASIC2.29□□□□□ -2.04
SHOXO15266 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHOXO15266 AC008555.8-201ENST00000623602 2168 ntBASIC2.28□□□□□ -2.04
SHOXO15266 MIR26A1-201ENST00000362205 77 ntBASIC2.28□□□□□ -2.04
SHOXO15266 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOXO15266 RNU6-893P-201ENST00000458841 100 ntBASIC2.28□□□□□ -2.04
SHOXO15266 RNA5SP341-201ENST00000516261 117 ntBASIC2.28□□□□□ -2.04
SHOXO15266 MIR4305-201ENST00000583252 102 ntBASIC2.28□□□□□ -2.04
SHOXO15266 Y_RNA.281-201ENST00000364774 94 ntBASIC2.27□□□□□ -2.05
SHOXO15266 RNA5SP261-201ENST00000410536 106 ntBASIC2.27□□□□□ -2.05
SHOXO15266 AL139132.1-201ENST00000431587 344 ntBASIC2.27□□□□□ -2.05
SHOXO15266 RNU2-11P-201ENST00000459191 187 ntBASIC2.27□□□□□ -2.05
SHOXO15266 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.27□□□□□ -2.05
SHOXO15266 SUMO2P16-201ENST00000519475 264 ntBASIC2.27□□□□□ -2.05
SHOXO15266 EIF4BP1-201ENST00000554881 351 ntBASIC2.27□□□□□ -2.05
SHOXO15266 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SHOXO15266 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHOXO15266 AL022718.1-201ENST00000412004 84 ntBASIC2.26□□□□□ -2.05
SHOXO15266 EEF1A1P41-201ENST00000414667 207 ntBASIC2.26□□□□□ -2.05
SHOXO15266 SNORD123-201ENST00000459473 70 ntBASIC2.26□□□□□ -2.05
SHOXO15266 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
SHOXO15266 RNU7-123P-201ENST00000515911 60 ntBASIC2.26□□□□□ -2.05
SHOXO15266 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SHOXO15266 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SHOXO15266 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
SHOXO15266 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
SHOXO15266 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHOXO15266 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
SHOXO15266 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
SHOXO15266 RPS29P29-201ENST00000456396 171 ntBASIC2.25□□□□□ -2.05
SHOXO15266 RNU7-67P-201ENST00000459003 62 ntBASIC2.25□□□□□ -2.05
SHOXO15266 AC003982.1-202ENST00000469928 248 ntBASIC2.25□□□□□ -2.05
SHOXO15266 MIR4679-2-201ENST00000578358 77 ntBASIC2.25□□□□□ -2.05
SHOXO15266 MIR3163-201ENST00000581592 73 ntBASIC2.25□□□□□ -2.05
SHOXO15266 AC021613.1-201ENST00000623880 111 ntBASIC2.25□□□□□ -2.05
SHOXO15266 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
SHOXO15266 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHOXO15266 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
SHOXO15266 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHOXO15266 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SHOXO15266 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
SHOXO15266 AL589743.1-201ENST00000551932 2712 ntBASIC2.24□□□□□ -2.05
SHOXO15266 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
SHOXO15266 Y_RNA.49-201ENST00000362714 112 ntBASIC2.24□□□□□ -2.05
SHOXO15266 RNU6-414P-201ENST00000363705 104 ntBASIC2.24□□□□□ -2.05
SHOXO15266 RNU4-16P-201ENST00000364737 141 ntBASIC2.24□□□□□ -2.05
SHOXO15266 MIR526A1-201ENST00000384897 85 ntBASIC2.24□□□□□ -2.05
SHOXO15266 SNORD12C-201ENST00000386307 89 ntBASIC2.24□□□□□ -2.05
SHOXO15266 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
SHOXO15266 S100A11P2-201ENST00000467589 312 ntBASIC2.24□□□□□ -2.05
SHOXO15266 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.24□□□□□ -2.05
SHOXO15266 MIR3152-201ENST00000579801 74 ntBASIC2.24□□□□□ -2.05
SHOXO15266 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOXO15266 FAM106DP-201ENST00000586416 501 ntBASIC2.24□□□□□ -2.05
SHOXO15266 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHOXO15266 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
SHOXO15266 AL137790.1-201ENST00000634283 177 ntBASIC2.23□□□□□ -2.05
SHOXO15266 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHOXO15266 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SHOXO15266 Y_RNA.85-201ENST00000363014 111 ntBASIC2.22□□□□□ -2.05
SHOXO15266 Y_RNA.494-201ENST00000384432 111 ntBASIC2.22□□□□□ -2.05
SHOXO15266 Y_RNA.537-201ENST00000384626 109 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms