Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AP000942.4-201ENST00000604811 241 ntBASIC-0.06□□□□□ -2.42
LSM1O15116 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.06□□□□□ -2.42
LSM1O15116 SNORD38B-202ENST00000625943 69 ntBASIC-0.06□□□□□ -2.42
LSM1O15116 RNA5SP214-201ENST00000363378 118 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 RNU6-801P-201ENST00000364087 105 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 MIR588-201ENST00000384900 83 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 MIR548O-201ENST00000408583 114 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 RNU2-59P-201ENST00000410482 191 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 AC007751.1-201ENST00000529260 376 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 AC133485.4-201ENST00000561835 220 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 MIR1273G-201ENST00000577677 100 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
LSM1O15116 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 MIR559-201ENST00000385188 96 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 MIR1257-201ENST00000408490 117 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 RNU6-938P-201ENST00000411285 103 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 FCF1P9-201ENST00000412546 282 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 AL589823.1-201ENST00000429577 183 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 RNU7-67P-201ENST00000459003 62 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.08□□□□□ -2.42
LSM1O15116 MIR3145-201ENST00000580727 82 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 AL021707.8-201ENST00000609428 183 ntBASIC-0.08□□□□□ -2.42
LSM1O15116 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.08□□□□□ -2.42
LSM1O15116 MIR30D-201ENST00000362283 70 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 RNU6-845P-201ENST00000362578 103 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 MIR628-201ENST00000385229 95 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 RNU6-602P-201ENST00000411155 105 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 PDCL2P1-201ENST00000419302 352 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 AC099799.1-201ENST00000439809 192 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 AC010655.3-201ENST00000478818 450 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 MIR5690-201ENST00000583739 73 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 VN1R91P-201ENST00000594377 169 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 MIR6755-201ENST00000619993 66 ntBASIC-0.09□□□□□ -2.42
LSM1O15116 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 RNA5SP117-201ENST00000365294 118 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 SNORD116-4-201ENST00000384733 96 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 MIR489-201ENST00000384923 84 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 MIR518F-201ENST00000384973 87 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 MT-TF-201ENST00000387314 71 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 AC087499.4-201ENST00000448505 178 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 RNU6-958P-201ENST00000516995 106 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 AC124312.5-201ENST00000604451 268 ntBASIC-0.1□□□□□ -2.43
LSM1O15116 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
LSM1O15116 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 SNORD63-201ENST00000384262 68 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 SNORA26.5-201ENST00000391215 123 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 RNA5SP63-201ENST00000391225 112 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 AC096644.2-201ENST00000429278 159 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 SEPT7P4-201ENST00000437076 306 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.11□□□□□ -2.43
LSM1O15116 AC011373.1-201ENST00000607270 237 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.11□□□□□ -2.43
LSM1O15116 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.12□□□□□ -2.43
LSM1O15116 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 RNU6-490P-201ENST00000362985 107 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 SNORA40.5-201ENST00000391061 128 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 HMGN1P33-201ENST00000432945 451 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 MIR4272-201ENST00000635924 64 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 MIR371B-201ENST00000638082 66 ntBASIC-0.12□□□□□ -2.43
LSM1O15116 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 RNU7-149P-201ENST00000516739 59 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 AC131281.1-201ENST00000522984 164 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 AC084782.3-201ENST00000612282 578 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 MIR8087-201ENST00000612745 78 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 MIR8066-201ENST00000617280 78 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 MIR6828-201ENST00000636181 60 ntBASIC-0.13□□□□□ -2.43
LSM1O15116 SNORA9.1-201ENST00000362412 131 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 SNORD115-28-201ENST00000363931 81 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
LSM1O15116 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 RNU7-110P-201ENST00000516891 62 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 MIR5190-201ENST00000581537 80 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.14□□□□□ -2.43
LSM1O15116 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 RNU6-740P-201ENST00000364734 105 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 AL358176.2-201ENST00000425769 204 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 RNU7-53P-201ENST00000516705 60 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 RNA5SP268-201ENST00000516828 124 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 RNU6-699P-201ENST00000517081 110 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 MIR7107-201ENST00000611489 80 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms