Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
CUX2O14529 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.6□□□□□ -2.31
CUX2O14529 RNU6-437P-201ENST00000459408 95 ntBASIC0.6□□□□□ -2.31
CUX2O14529 AC127455.1-201ENST00000565496 145 ntBASIC0.6□□□□□ -2.31
CUX2O14529 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
CUX2O14529 RNU6-674P-201ENST00000363831 107 ntBASIC0.59□□□□□ -2.32
CUX2O14529 RNU6-801P-201ENST00000364087 105 ntBASIC0.59□□□□□ -2.32
CUX2O14529 Y_RNA.252-201ENST00000364556 101 ntBASIC0.59□□□□□ -2.32
CUX2O14529 RNU1-115P-201ENST00000365329 160 ntBASIC0.59□□□□□ -2.32
CUX2O14529 Y_RNA.424-201ENST00000384063 103 ntBASIC0.59□□□□□ -2.32
CUX2O14529 Y_RNA.457-201ENST00000384237 111 ntBASIC0.59□□□□□ -2.32
CUX2O14529 MIR1278-201ENST00000408753 81 ntBASIC0.59□□□□□ -2.32
CUX2O14529 RNU7-141P-201ENST00000459304 62 ntBASIC0.59□□□□□ -2.32
CUX2O14529 AC107297.1-201ENST00000459991 176 ntBASIC0.59□□□□□ -2.32
CUX2O14529 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.59□□□□□ -2.32
CUX2O14529 FGF7P4-201ENST00000509595 295 ntBASIC0.59□□□□□ -2.32
CUX2O14529 RNU6-875P-201ENST00000516488 106 ntBASIC0.59□□□□□ -2.32
CUX2O14529 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.32
CUX2O14529 AC011195.1-201ENST00000578177 177 ntBASIC0.59□□□□□ -2.32
CUX2O14529 SNORD113-5-201ENST00000607261 78 ntBASIC0.59□□□□□ -2.32
CUX2O14529 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CUX2O14529 RNU4-50P-201ENST00000364361 141 ntBASIC0.58□□□□□ -2.32
CUX2O14529 Y_RNA.529-201ENST00000384586 119 ntBASIC0.58□□□□□ -2.32
CUX2O14529 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.58□□□□□ -2.32
CUX2O14529 RNU7-152P-201ENST00000458982 64 ntBASIC0.58□□□□□ -2.32
CUX2O14529 snoU13.11-201ENST00000459219 104 ntBASIC0.58□□□□□ -2.32
CUX2O14529 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.58□□□□□ -2.32
CUX2O14529 RNA5SP67-201ENST00000516422 131 ntBASIC0.58□□□□□ -2.32
CUX2O14529 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
CUX2O14529 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.58□□□□□ -2.32
CUX2O14529 MIR4493-201ENST00000584016 73 ntBASIC0.58□□□□□ -2.32
CUX2O14529 Y_RNA.5-201ENST00000362334 102 ntBASIC0.57□□□□□ -2.32
CUX2O14529 RNU6-654P-201ENST00000364373 107 ntBASIC0.57□□□□□ -2.32
CUX2O14529 SNORA51.10-201ENST00000384418 136 ntBASIC0.57□□□□□ -2.32
CUX2O14529 Y_RNA.496-201ENST00000384444 101 ntBASIC0.57□□□□□ -2.32
CUX2O14529 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.57□□□□□ -2.32
CUX2O14529 MIR1302-7-201ENST00000408841 72 ntBASIC0.57□□□□□ -2.32
CUX2O14529 MIR1468-201ENST00000410600 86 ntBASIC0.57□□□□□ -2.32
CUX2O14529 SNORD19B-201ENST00000459623 84 ntBASIC0.57□□□□□ -2.32
CUX2O14529 AC098869.1-201ENST00000481627 292 ntBASIC0.57□□□□□ -2.32
CUX2O14529 RNU6-976P-201ENST00000516086 111 ntBASIC0.57□□□□□ -2.32
CUX2O14529 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
CUX2O14529 RNU6-1048P-201ENST00000364054 107 ntBASIC0.56□□□□□ -2.32
CUX2O14529 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CUX2O14529 MIR604-201ENST00000384880 94 ntBASIC0.56□□□□□ -2.32
CUX2O14529 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
CUX2O14529 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
CUX2O14529 RNU6-847P-201ENST00000411115 108 ntBASIC0.56□□□□□ -2.32
CUX2O14529 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
CUX2O14529 AC008507.4-201ENST00000585464 127 ntBASIC0.56□□□□□ -2.32
CUX2O14529 SNORD58B-201ENST00000607313 66 ntBASIC0.56□□□□□ -2.32
CUX2O14529 MTND1P7-201ENST00000632801 297 ntBASIC0.56□□□□□ -2.32
CUX2O14529 Y_RNA.197-201ENST00000364004 102 ntBASIC0.55□□□□□ -2.32
CUX2O14529 RNU6-144P-201ENST00000383951 107 ntBASIC0.55□□□□□ -2.32
CUX2O14529 SNORA8.3-201ENST00000384679 139 ntBASIC0.55□□□□□ -2.32
CUX2O14529 MTCO2P33-201ENST00000402100 465 ntBASIC0.55□□□□□ -2.32
CUX2O14529 SNRPGP14-201ENST00000435400 219 ntBASIC0.55□□□□□ -2.32
CUX2O14529 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.55□□□□□ -2.32
CUX2O14529 NDUFA4P2-201ENST00000489989 244 ntBASIC0.55□□□□□ -2.32
CUX2O14529 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.55□□□□□ -2.32
CUX2O14529 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
CUX2O14529 AC006441.5-201ENST00000612680 209 ntBASIC0.55□□□□□ -2.32
CUX2O14529 RNU6-934P-201ENST00000365154 107 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNU6-1009P-201ENST00000390996 107 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNU2-14P-201ENST00000411053 191 ntBASIC0.54□□□□□ -2.32
CUX2O14529 AC040926.1-201ENST00000530195 238 ntBASIC0.54□□□□□ -2.32
CUX2O14529 AP000753.3-201ENST00000604083 169 ntBASIC0.54□□□□□ -2.32
CUX2O14529 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
CUX2O14529 RNU6-1115P-201ENST00000362490 106 ntBASIC0.54□□□□□ -2.32
CUX2O14529 Y_RNA.58-201ENST00000362807 102 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNU4-73P-201ENST00000363164 141 ntBASIC0.54□□□□□ -2.32
CUX2O14529 Y_RNA.154-201ENST00000363624 102 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNU6-899P-201ENST00000363947 107 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNY3P1-201ENST00000365085 102 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNA5SP95-201ENST00000410319 137 ntBASIC0.54□□□□□ -2.32
CUX2O14529 RNU6-613P-201ENST00000410412 108 ntBASIC0.54□□□□□ -2.32
CUX2O14529 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.54□□□□□ -2.32
CUX2O14529 SNORA36.2-201ENST00000384004 127 ntBASIC0.53□□□□□ -2.33
CUX2O14529 Y_RNA.552-201ENST00000384665 112 ntBASIC0.53□□□□□ -2.33
CUX2O14529 SNORD72-201ENST00000390994 80 ntBASIC0.53□□□□□ -2.33
CUX2O14529 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.33
CUX2O14529 MTND5P20-201ENST00000448677 143 ntBASIC0.53□□□□□ -2.33
CUX2O14529 MIR548AO-201ENST00000579992 96 ntBASIC0.53□□□□□ -2.33
CUX2O14529 AC243994.1-201ENST00000618627 109 ntBASIC0.53□□□□□ -2.33
CUX2O14529 AC015726.2-201ENST00000620112 122 ntBASIC0.53□□□□□ -2.33
CUX2O14529 RNU4-80P-201ENST00000363200 141 ntBASIC0.52□□□□□ -2.33
CUX2O14529 Y_RNA.263-201ENST00000364659 114 ntBASIC0.52□□□□□ -2.33
CUX2O14529 SNORA72.4-201ENST00000384174 132 ntBASIC0.52□□□□□ -2.33
CUX2O14529 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
CUX2O14529 RNU7-67P-201ENST00000459003 62 ntBASIC0.52□□□□□ -2.33
CUX2O14529 RNU6-977P-201ENST00000516411 103 ntBASIC0.52□□□□□ -2.33
CUX2O14529 uc_338.4-201ENST00000616635 176 ntBASIC0.52□□□□□ -2.33
CUX2O14529 Y_RNA.168-201ENST00000363740 102 ntBASIC0.51□□□□□ -2.33
CUX2O14529 Y_RNA.376-201ENST00000365638 108 ntBASIC0.51□□□□□ -2.33
CUX2O14529 Y_RNA.579-201ENST00000390939 94 ntBASIC0.51□□□□□ -2.33
CUX2O14529 AC244023.1-201ENST00000426884 112 ntBASIC0.51□□□□□ -2.33
CUX2O14529 AC010655.3-201ENST00000478818 450 ntBASIC0.51□□□□□ -2.33
CUX2O14529 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
CUX2O14529 RNU6-1170P-201ENST00000515974 106 ntBASIC0.51□□□□□ -2.33
CUX2O14529 AC242498.1-201ENST00000604134 111 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms