Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 MT-TQ-201ENST00000387372 72 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 U8.15-201ENST00000390947 134 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 RNU7-53P-201ENST00000516705 60 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 RNU6-765P-201ENST00000516916 99 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 AC138749.4-201ENST00000563970 127 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 AC127455.1-201ENST00000565496 145 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 MIR4263-201ENST00000584745 83 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 AC245884.10-201ENST00000597355 337 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 AC018462.2-201ENST00000605375 395 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 U7.6-201ENST00000610841 64 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 AP001282.2-201ENST00000616149 309 ntBASIC-1.02□□□□□ -2.57
SMIM23A6NLE4 SNORA25.7-201ENST00000364375 127 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 MTATP6P26-201ENST00000445926 662 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 MIR4491-201ENST00000581087 68 ntBASIC-1.03□□□□□ -2.57
SMIM23A6NLE4 MIR148A-201ENST00000362215 68 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 RNU4-75P-201ENST00000364621 146 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 RNU6-273P-201ENST00000516937 96 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 MIR378D2-201ENST00000580636 98 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 MIR3942-201ENST00000585264 109 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 AC087588.2-201ENST00000617667 426 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 Z69908.1-201ENST00000622603 247 ntBASIC-1.04□□□□□ -2.58
SMIM23A6NLE4 RNU6-726P-201ENST00000364680 107 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 SNORA22B-201ENST00000383876 138 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 SNORA75-201ENST00000384158 137 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 AL590004.1-201ENST00000405321 300 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 RNU6-735P-201ENST00000410612 107 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 AC108059.2-201ENST00000434626 151 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 MTND3P7-201ENST00000474435 343 ntBASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.05□□□□□ -2.58
SMIM23A6NLE4 RNA5SP245-201ENST00000364239 121 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 RPL30P15-201ENST00000457129 321 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 RNU6-470P-201ENST00000515954 104 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 RNU7-115P-201ENST00000516433 55 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 MIR2681-201ENST00000581814 105 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 AL162376.1-201ENST00000624117 175 ntBASIC-1.06□□□□□ -2.58
SMIM23A6NLE4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 MIR548L-201ENST00000408303 86 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 AC244250.2-201ENST00000418731 148 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 SNORD11-201ENST00000459124 84 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 RNU6-437P-201ENST00000459408 95 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 RN7SKP298-201ENST00000515950 94 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 RNU1-54P-201ENST00000517181 120 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 MIR4436A-201ENST00000585278 85 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 AC087752.4-201ENST00000605911 462 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 uc_338.28-201ENST00000612082 187 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 MIR6128-201ENST00000615528 109 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 AL662814.1-201ENST00000617364 121 ntBASIC-1.07□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 SNORD114-15-201ENST00000364687 72 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 RNU6-811P-201ENST00000384069 107 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 SNORA40.5-201ENST00000391061 128 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 RNU6-938P-201ENST00000411285 103 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 AC109327.2-201ENST00000448339 378 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 SNORD5.1-201ENST00000458800 75 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 RPS29P24-201ENST00000486345 171 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 AC024933.1-201ENST00000608472 348 ntBASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.08□□□□□ -2.58
SMIM23A6NLE4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 SNORA27-201ENST00000384323 126 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 RNA5SP237-201ENST00000410414 113 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 RNU6-710P-201ENST00000410424 105 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 AC096949.1-201ENST00000412047 152 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 NAMPTP3-201ENST00000569273 224 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 MIR548AY-201ENST00000617669 107 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 AL603755.1-201ENST00000619504 163 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 MIR6086-201ENST00000638065 55 ntBASIC-1.09□□□□□ -2.58
SMIM23A6NLE4 RNU4-50P-201ENST00000364361 141 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 RNU6-20P-201ENST00000384106 107 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 AF228730.4-201ENST00000421457 183 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 RNU2-11P-201ENST00000459191 187 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 RPL7P42-201ENST00000481005 679 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 SNORA25.16-201ENST00000516741 121 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 MIR3681-201ENST00000580089 72 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 AL590491.3-201ENST00000610731 82 ntBASIC-1.1□□□□□ -2.59
SMIM23A6NLE4 MIR655-201ENST00000362159 97 ntBASIC-1.11□□□□□ -2.59
SMIM23A6NLE4 SNORA63.5-201ENST00000363548 123 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms