Protein–RNA interactions for Protein: U3KQ54

PMF1-BGLAP, HCG2044777, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-BGLAPU3KQ54 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 MIR590-201ENST00000385008 97 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC245047.3-201ENST00000429428 127 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNU7-123P-201ENST00000515911 60 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 ZNF861P-201ENST00000588126 639 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 ICE2P2-201ENST00000483823 2787 ntBASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNU6-440P-201ENST00000390882 105 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNA5SP109-201ENST00000391010 116 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC009238.1-201ENST00000442165 424 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC009237.6-201ENST00000446969 424 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNU7-164P-201ENST00000459221 62 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC068339.1-201ENST00000526965 141 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AP003484.1-201ENST00000530974 250 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC024614.2-201ENST00000577584 372 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 MIR3162-201ENST00000581818 82 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 HSPE1P19-201ENST00000603327 295 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 AC015726.2-201ENST00000620112 122 ntBASIC2.41□□□□□ -2.02
PMF1-BGLAPU3KQ54 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PMF1-BGLAPU3KQ54 RNU1-133P-201ENST00000364867 167 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNA5SP482-201ENST00000391269 118 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 U8.17-201ENST00000391292 132 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RPL23AP94-201ENST00000512518 302 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORA40.13-201ENST00000516379 120 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU2-35P-201ENST00000516446 142 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU7-70P-201ENST00000516941 66 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-762P-201ENST00000517107 102 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-1116P-201ENST00000517269 99 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC084364.2-201ENST00000546924 395 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC091932.4-201ENST00000623386 200 ntBASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
PMF1-BGLAPU3KQ54 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.265-201ENST00000364677 108 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-1113P-201ENST00000384348 107 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.544-201ENST00000384650 113 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR548D2-201ENST00000384955 97 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORA18.7-201ENST00000516910 131 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR4305-201ENST00000583252 102 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 AL596211.1-201ENST00000569873 2277 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIRLET7C-201ENST00000362160 84 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.351-201ENST00000365436 96 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.388-201ENST00000383919 113 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 AL138827.1-201ENST00000402666 306 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORD109B-201ENST00000458961 67 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORD109A-201ENST00000459128 67 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC114811.1-201ENST00000507207 168 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORA31.4-201ENST00000516049 129 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-844P-201ENST00000517175 102 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC079600.2-201ENST00000550076 130 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 U4atac.1-201ENST00000618345 95 ntBASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PMF1-BGLAPU3KQ54 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-23P-201ENST00000363283 107 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU4-16P-201ENST00000364737 141 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR759-201ENST00000390224 91 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNY4P29-201ENST00000410801 97 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC087499.4-201ENST00000448505 178 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC022202.1-201ENST00000613515 211 ntBASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU6-904P-201ENST00000516206 101 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNU7-28P-201ENST00000516759 62 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR3683-201ENST00000580847 82 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR8054-201ENST00000620877 86 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
PMF1-BGLAPU3KQ54 AL442644.1-201ENST00000454390 3105 ntBASIC2.35□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.78-201ENST00000362970 110 ntBASIC2.35□□□□□ -2.03
PMF1-BGLAPU3KQ54 SNORD115-3-201ENST00000363100 82 ntBASIC2.35□□□□□ -2.03
PMF1-BGLAPU3KQ54 Y_RNA.558-201ENST00000384685 113 ntBASIC2.35□□□□□ -2.03
PMF1-BGLAPU3KQ54 RNY1P7-201ENST00000384743 110 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms