Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSX2IPQ9Y2D8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 RNY1P5-201ENST00000383890 115 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 Y_RNA.398-201ENST00000383952 99 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 RPL30P13-201ENST00000418873 348 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 AC008507.4-201ENST00000585464 127 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.97□□□□□ -2.09
SSX2IPQ9Y2D8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD116-18-201ENST00000383961 92 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 MIR802-201ENST00000390235 94 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 RNU7-200P-201ENST00000516105 62 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 MIR378D2-201ENST00000580636 98 ntBASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX2IPQ9Y2D8 RNA5SP190-201ENST00000365222 118 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.506-201ENST00000384494 102 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.521-201ENST00000384560 114 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 RNA5SP212-201ENST00000391223 107 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 snoU13.27-201ENST00000459278 104 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-365P-201ENST00000517113 106 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 MTND5P41-201ENST00000517498 206 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 MIR3122-201ENST00000577243 73 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 MIR4709-201ENST00000577272 72 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 AC097639.2-201ENST00000603159 172 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SSX2IPQ9Y2D8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD14E-201ENST00000364009 85 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD50B-201ENST00000364995 70 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 AC027279.3-201ENST00000625055 122 ntBASIC1.94□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-442P-201ENST00000383968 104 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-125P-201ENST00000384505 107 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-360P-201ENST00000390944 104 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD72-201ENST00000390994 80 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 HMGN2P32-201ENST00000444648 269 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNU7-34P-201ENST00000459394 64 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 CYCTP-201ENST00000504253 315 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD116-25-201ENST00000516517 92 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-504P-201ENST00000516568 104 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 SNORD45.4-201ENST00000516629 73 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 MIR3646-201ENST00000578301 84 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 MIR3133-201ENST00000583157 78 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 AC120024.3-201ENST00000603167 156 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.93□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-151P-201ENST00000364158 107 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-597P-201ENST00000365620 102 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.393-201ENST00000383936 102 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-163P-201ENST00000384396 106 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
SSX2IPQ9Y2D8 MIRLET7C-201ENST00000362160 84 ntBASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 RNU6-774P-201ENST00000363238 107 ntBASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 AL392103.1-201ENST00000447000 198 ntBASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 MIR6844-201ENST00000637122 62 ntBASIC1.91□□□□□ -2.1
SSX2IPQ9Y2D8 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 SNORA25.7-201ENST00000364375 127 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD24-201ENST00000383884 75 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-424P-201ENST00000384367 105 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-768P-201ENST00000384683 107 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD37.2-201ENST00000391075 66 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 CALM2P4-201ENST00000430810 426 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms