Protein–RNA interactions for Protein: Q9HCE7

SMURF1, E3 ubiquitin-protein ligase SMURF1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1Q9HCE7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 RNU6-1149P-201ENST00000516810 97 ntBASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 AL359881.1-201ENST00000602916 267 ntBASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMURF1Q9HCE7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 Y_RNA.629-201ENST00000411368 105 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 SNORA59A-201ENST00000459326 152 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 RNU2-60P-201ENST00000517290 128 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 AP003484.1-201ENST00000530974 250 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 AC090049.2-201ENST00000550377 109 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 MIR3121-201ENST00000579680 77 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 MIR3162-201ENST00000581818 82 ntBASIC2.16□□□□□ -2.06
SMURF1Q9HCE7 AL442644.1-201ENST00000454390 3105 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 SNORA2.2-201ENST00000365473 135 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 MIR136-201ENST00000385207 82 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 RNU7-70P-201ENST00000516941 66 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 U4.3-201ENST00000621047 82 ntBASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SMURF1Q9HCE7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 RNU6-647P-201ENST00000364243 107 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.294-201ENST00000364916 102 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 UBE2DNL-203ENST00000474922 222 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 SCARNA15-202ENST00000516881 127 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 SNORA18.7-201ENST00000516910 131 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 AL022345.2-201ENST00000606307 135 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 MIR6817-201ENST00000615588 66 ntBASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.14□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.114-201ENST00000363265 113 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 RNU6-309P-201ENST00000364573 106 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 AC093850.1-201ENST00000454121 251 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 RNU5E-3P-201ENST00000515913 68 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP236-201ENST00000516169 116 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 RNU6-659P-201ENST00000516454 104 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 RNU6-113P-201ENST00000516653 101 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 SNORD36C-201ENST00000516733 66 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
SMURF1Q9HCE7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNU6-414P-201ENST00000363705 104 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 SNORA1.2-201ENST00000365189 134 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 SNORA40.5-201ENST00000391061 128 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNU6-938P-201ENST00000411285 103 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 AL158147.1-201ENST00000443970 75 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNU7-107P-201ENST00000459121 61 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNU7-80P-201ENST00000459562 61 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP320-201ENST00000516263 124 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP148-201ENST00000516527 94 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 MIR4778-201ENST00000577635 80 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 MIR376A2-201ENST00000636782 80 ntBASIC2.12□□□□□ -2.07
SMURF1Q9HCE7 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 RNU6-235P-201ENST00000362644 107 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.273-201ENST00000364703 102 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.280-201ENST00000364765 112 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 Y_RNA.454-201ENST00000384224 113 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AC244636.1-201ENST00000421152 228 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AC107297.1-201ENST00000459991 176 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SMURF1Q9HCE7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-34-201ENST00000362441 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-12-201ENST00000362583 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-29-201ENST00000362834 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-9-201ENST00000362912 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-21-201ENST00000362963 81 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-14-201ENST00000363090 81 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-13-201ENST00000363358 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-41-201ENST00000363608 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-11-201ENST00000363616 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-5-201ENST00000363633 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-39-201ENST00000363694 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-4-201ENST00000363810 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-16-201ENST00000363887 82 ntBASIC2.1□□□□□ -2.07
SMURF1Q9HCE7 SNORD115-6-201ENST00000363942 82 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms