Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC104850.1-201ENST00000435940 476 ntBASIC-1.68□□□□□ -2.68
SCAPERQ9BY12 Vault.3-201ENST00000516676 95 ntBASIC-1.68□□□□□ -2.68
SCAPERQ9BY12 AC011373.1-201ENST00000607270 237 ntBASIC-1.68□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 SNORD115-42-201ENST00000364273 82 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 SNORA72-201ENST00000384339 132 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 SNORD56B-201ENST00000384713 71 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 RNU6-325P-201ENST00000411132 105 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 RNU7-161P-201ENST00000517289 62 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 AL137161.1-201ENST00000532231 390 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 AC099654.12-201ENST00000639868 649 ntBASIC-1.69□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 RNU4-75P-201ENST00000364621 146 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 RNU6-119P-201ENST00000364882 107 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 SNORD115-44-201ENST00000365391 82 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 AL031667.1-201ENST00000440222 725 ntBASIC-1.7□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 RNU6-931P-201ENST00000363850 107 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 RNU6-454P-201ENST00000364292 107 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 RNU2-29P-201ENST00000410423 189 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 MTND2P18-201ENST00000419962 1030 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 AC138207.3-201ENST00000585289 166 ntBASIC-1.71□□□□□ -2.68
SCAPERQ9BY12 SNORD115-34-201ENST00000362441 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-12-201ENST00000362583 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-29-201ENST00000362834 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-9-201ENST00000362912 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-21-201ENST00000362963 81 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-14-201ENST00000363090 81 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-13-201ENST00000363358 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-11-201ENST00000363616 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-5-201ENST00000363633 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-39-201ENST00000363694 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-4-201ENST00000363810 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-16-201ENST00000363887 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-6-201ENST00000363942 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-865P-201ENST00000364772 107 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-15-201ENST00000364809 81 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-1-201ENST00000364961 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-26-201ENST00000365067 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-10-201ENST00000365073 81 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-43-201ENST00000365503 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-36-201ENST00000365629 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-281P-201ENST00000384212 103 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-933P-201ENST00000384424 107 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-900P-201ENST00000384498 102 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 MTATP6P20-201ENST00000414147 562 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU7-104P-201ENST00000459398 79 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 AC022137.1-201ENST00000483735 151 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 AL356055.1-201ENST00000602528 446 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORD115-40-201ENST00000606510 82 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 RNU6-489P-201ENST00000618289 107 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 uc_338.10-201ENST00000621872 182 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 AL391262.2-201ENST00000622466 494 ntBASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.72□□□□□ -2.68
SCAPERQ9BY12 SNORA63.5-201ENST00000363548 123 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 RNU6-108P-201ENST00000365558 107 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 MIR1-2-201ENST00000384961 85 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 MIR181B2-201ENST00000385004 89 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 RNA5SP475-201ENST00000410568 110 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 RNU7-53P-201ENST00000516705 60 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 AL121757.2-201ENST00000611223 313 ntBASIC-1.73□□□□□ -2.69
SCAPERQ9BY12 RNU4-28P-201ENST00000364739 141 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 RNA5SP237-201ENST00000410414 113 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 RNA5SP484-201ENST00000458857 111 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 MTCO1P29-201ENST00000496868 288 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 RNU6-966P-201ENST00000516479 104 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 AC134698.4-201ENST00000523451 826 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 AL662814.1-201ENST00000617364 121 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 RNU6-660P-201ENST00000364566 109 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 SNORD22.1-201ENST00000516331 125 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 AC022878.1-201ENST00000530684 149 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 AP001282.2-201ENST00000616149 309 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 AL163152.1-201ENST00000642001 374 ntBASIC-1.74□□□□□ -2.69
SCAPERQ9BY12 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 SNORD114-29-201ENST00000364819 70 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 RNU6-370P-201ENST00000411008 104 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 AC096949.1-201ENST00000412047 152 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 USP9YP30-201ENST00000430729 455 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 AP000533.3-201ENST00000447704 118 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 SNORA25.16-201ENST00000516741 121 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 AP000942.4-201ENST00000604811 241 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 AC099654.13-201ENST00000639774 207 ntBASIC-1.75□□□□□ -2.69
SCAPERQ9BY12 MIR147A-201ENST00000385079 72 ntBASIC-1.76□□□□□ -2.69
SCAPERQ9BY12 AC008507.4-201ENST00000585464 127 ntBASIC-1.76□□□□□ -2.69
SCAPERQ9BY12 JPX_2.1-201ENST00000614161 69 ntBASIC-1.76□□□□□ -2.69
SCAPERQ9BY12 RNA5SP403-201ENST00000363598 108 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms