Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SNORD28B-201ENST00000390993 75 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 AL603910.2-201ENST00000407268 136 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 RPS3AP1-201ENST00000413190 320 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 RPL21P38-201ENST00000418090 167 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 Y_RNA.637-201ENST00000459424 114 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.85□□□□□ -2.27
SSX3Q99909 AC015726.2-201ENST00000620112 122 ntBASIC0.85□□□□□ -2.27
SSX3Q99909 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.85□□□□□ -2.27
SSX3Q99909 AL442644.1-201ENST00000454390 3105 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 Y_RNA.14-201ENST00000362415 103 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 RNU6-806P-201ENST00000365147 105 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 U8.17-201ENST00000391292 132 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 AC091959.1-201ENST00000495857 238 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.84□□□□□ -2.27
SSX3Q99909 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 MIR5692C2-201ENST00000577959 77 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 MIR4452-201ENST00000583004 71 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 AC006441.5-201ENST00000612680 209 ntBASIC0.84□□□□□ -2.27
SSX3Q99909 RNU6-1272P-201ENST00000362776 107 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 Y_RNA.293-201ENST00000364908 93 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 RNU6-383P-201ENST00000410864 94 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 BTF3P11-201ENST00000426582 477 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.83□□□□□ -2.28
SSX3Q99909 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 AP003733.2-201ENST00000529409 171 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 AC023827.1-201ENST00000569247 97 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
SSX3Q99909 AL356055.1-201ENST00000602528 446 ntBASIC0.83□□□□□ -2.28
SSX3Q99909 MIR367-201ENST00000362299 68 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 Y_RNA.64-201ENST00000362845 102 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 SNORA1.2-201ENST00000365189 134 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 Y_RNA.370-201ENST00000365589 108 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 RNU6-662P-201ENST00000384253 104 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 MIR570-201ENST00000384917 97 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
SSX3Q99909 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
SSX3Q99909 Y_RNA.701-201ENST00000516812 110 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 RNU7-181P-201ENST00000517234 74 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 MIR4724-201ENST00000579485 89 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 AC022140.2-201ENST00000623500 188 ntBASIC0.82□□□□□ -2.28
SSX3Q99909 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
SSX3Q99909 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
SSX3Q99909 Y_RNA.26-201ENST00000362539 101 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 RNA5SP496-201ENST00000391240 109 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 SNORA27.4-201ENST00000516650 95 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 RNU7-149P-201ENST00000516739 59 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 AC044792.1-201ENST00000593294 196 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 uc_338.4-201ENST00000616635 176 ntBASIC0.81□□□□□ -2.28
SSX3Q99909 Y_RNA.153-201ENST00000363615 91 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 SNORA51.10-201ENST00000384418 136 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 AC005534.2-201ENST00000431047 433 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 SCARNA8-201ENST00000515924 131 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 RNU6-1137P-201ENST00000517073 99 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 AL049861.1-201ENST00000603130 150 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
SSX3Q99909 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
SSX3Q99909 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SSX3Q99909 Y_RNA.16-201ENST00000362421 102 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 RNU1-93P-201ENST00000364704 169 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 SNORA33.2-201ENST00000365413 134 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 RNU6-639P-201ENST00000384074 107 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 Y_RNA.537-201ENST00000384626 109 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 AL731563.1-201ENST00000442202 214 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 AL392103.1-201ENST00000447000 198 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 RNU4-57P-201ENST00000515980 135 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
SSX3Q99909 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 Y_RNA.84-201ENST00000363011 104 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 Y_RNA.217-201ENST00000364214 105 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 MIR548O-201ENST00000408583 114 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 RNU6-985P-201ENST00000410182 104 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 RNU6-847P-201ENST00000411115 108 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 AC113618.1-201ENST00000416747 285 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 Y_RNA.641-201ENST00000459414 105 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 SERF1AP1-201ENST00000514575 187 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 Y_RNA.673-201ENST00000516306 88 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 RNU7-25P-201ENST00000516544 62 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.78□□□□□ -2.28
SSX3Q99909 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.78□□□□□ -2.28
SSX3Q99909 AL078603.1-201ENST00000603824 313 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 MIR4791-201ENST00000607666 84 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms